RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CD300EQ496F6 205 aaPredicted RBP5.57□□□□□ -1.52
NPHP3-208ENST00000490993 K7EQG2 157 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 KLK9Q2XQG4 91 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 DEFB136Q30KP8 78 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 CFAP161Q6P656 301 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 OR5A1Q8NGJ0 315 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 PIFOQ8TCI5 191 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 LAMA3Q16787 3333 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 CHAC1Q9BUX1 264 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 CNFNQ9BYD5 112 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 TLN1Q9Y490 2541 aaKnown RBP5.56□□□□□ -1.52
NPHP3-208ENST00000490993 IGHV3-73A0A0B4J1V6 119 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 TRAV12-1A0A0B4J245 112 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 CRXO43186 299 aaPredicted RBP5.56□□□□□ -1.52
NPHP3-208ENST00000490993 GATA1P15976 413 aaPredicted RBP5.56□□□□□ -1.52
NPHP3-208ENST00000490993 TDRG1Q3Y452 100 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 LINC00173Q6ZV60 143 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 ZNF702PQ9H963 129 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 COX11Q9Y6N1 276 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 TAL2Q16559 108 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 SCRT2Q9NQ03 307 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
NPHP3-208ENST00000490993 XCL2Q9UBD3 114 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 TET2Q6N021 2002 aaPredicted RBP5.56□□□□□ -1.52
NPHP3-208ENST00000490993 IGF2RP11717 2491 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 H3BUT2 72 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 RPL24P83731 157 aaKnown RBP5.56□□□□□ -1.52
NPHP3-208ENST00000490993 ZFAND2AQ8N6M9 145 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 SPCS1Q9Y6A9 102 aa5.56□□□□□ -1.52
NPHP3-208ENST00000490993 IGHV4-4A0A075B6R2 117 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 DNAJC9-AS1A6NH13 148 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 SUMO4Q6EEV6 95 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 MRPL16Q9NX20 251 aaKnown RBP5.55□□□□□ -1.52
NPHP3-208ENST00000490993 NHP2Q9NX24 153 aaKnown RBP5.55□□□□□ -1.52
NPHP3-208ENST00000490993 CUL9Q8IWT3 2517 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 ABCA1O95477 2261 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 PRSS2P07478 247 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 LOC107984156A0A0G2JMH3 177 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 AVPP01185 164 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 RPL35AP18077 110 aaKnown RBP5.55□□□□□ -1.52
NPHP3-208ENST00000490993 AZU1P20160 251 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 GAGE1Q13065 139 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 ARL17AQ8IVW1 177 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 PIEZO2Q9H5I5 2752 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 TMEM238C9JI98 176 aa5.55□□□□□ -1.52
NPHP3-208ENST00000490993 MORN3Q6PF18 240 aaPredicted RBP5.55□□□□□ -1.52
NPHP3-208ENST00000490993 UBE2V1Q13404 147 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 Q8N1Y9 231 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 MYMXA0A1B0GTQ4 84 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 ADARB2-AS1A8MUL3 147 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 RNF185Q96GF1 192 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 KIR3DS1Q14943 382 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 MEIG1Q5JSS6 88 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 BVES-AS1Q5T3Y7 98 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 SAMD5Q5TGI4 173 aa5.54□□□□□ -1.52
NPHP3-208ENST00000490993 RPL39LQ96EH5 51 aaKnown RBP5.54□□□□□ -1.52
NPHP3-208ENST00000490993 LINC00310P59036 64 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
NPHP3-208ENST00000490993 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-208ENST00000490993 IGHV3-16A0A0C4DH30 117 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 EMP1P54849 157 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 ZFP2Q6ZN57 461 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 MED13LQ71F56 2210 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 PRSS29PA6NIE9 313 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 Q6ZS46 218 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 WFDC11Q8NEX6 87 aa5.53□□□□□ -1.52
NPHP3-208ENST00000490993 DLX4Q92988 240 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-208ENST00000490993 KLLNB2CW77 178 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 CIDEAO60543 219 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 DEFB1P60022 68 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 SPTAN1Q13813 2472 aaKnown RBP5.52□□□□□ -1.53
NPHP3-208ENST00000490993 AKAP6Q13023 2319 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 PLXNB1O43157 2135 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 NEGR1Q7Z3B1 354 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 RASL10AQ92737 203 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 ZNF479Q96JC4 524 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 MAP6D1Q9H9H5 199 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 DCANP1Q8TF63 244 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 APRG1Q8IVJ8 170 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 SPANXA1Q9NS26 97 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 NAV3Q8IVL0 2385 aa5.52□□□□□ -1.53
NPHP3-208ENST00000490993 PCP4P48539 62 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 RPL32P62910 135 aaKnown RBP5.51□□□□□ -1.53
NPHP3-208ENST00000490993 ODF1Q14990 250 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 Q6ZSV7 163 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 C16orf74Q96GX8 76 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 DSCAML1Q8TD84 2053 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 C9orf118A6NHY6 69 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 APOMO95445 188 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 CFHR3Q02985 330 aa5.51□□□□□ -1.53
NPHP3-208ENST00000490993 DEFB114Q30KQ6 69 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms