RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 MGST1P10620 155 aaKnown RBP13.26□□□□□ -0.29
SREBF1-216ENST00000490796 ZNF506Q5JVG8 444 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 LELP1Q5T871 98 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 DPPA3Q6W0C5 159 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 PGPEP1LA6NFU8 196 aa13.25□□□□□ -0.29
SREBF1-216ENST00000490796 GGTLC3B5MD39 225 aa13.25□□□□□ -0.29
SREBF1-216ENST00000490796 IFNA7P01567 189 aa13.25□□□□□ -0.29
SREBF1-216ENST00000490796 Q5VSD8 79 aa13.25□□□□□ -0.29
SREBF1-216ENST00000490796 NTN5Q8WTR8 489 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-216ENST00000490796 PTH2Q96A98 100 aa13.25□□□□□ -0.29
SREBF1-216ENST00000490796 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
SREBF1-216ENST00000490796 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
SREBF1-216ENST00000490796 IGLV2-11P01706 119 aa13.24□□□□□ -0.29
SREBF1-216ENST00000490796 LGALSLQ3ZCW2 172 aaPredicted RBP13.24□□□□□ -0.29
SREBF1-216ENST00000490796 DMBT1Q9UGM3 2413 aaPredicted RBP13.23□□□□□ -0.29
SREBF1-216ENST00000490796 A0A1W2PRE2 83 aa13.23□□□□□ -0.29
SREBF1-216ENST00000490796 A8MWV9 139 aa13.23□□□□□ -0.29
SREBF1-216ENST00000490796 RNASE3P12724 160 aaKnown RBP13.23□□□□□ -0.29
SREBF1-216ENST00000490796 TM2D2Q9BX73 214 aa13.23□□□□□ -0.29
SREBF1-216ENST00000490796 FAT1Q14517 4588 aa13.22□□□□□ -0.29
SREBF1-216ENST00000490796 TRAV34A0A0B4J273 112 aa13.22□□□□□ -0.29
SREBF1-216ENST00000490796 FABP5P3A8MUU1 101 aa13.22□□□□□ -0.29
SREBF1-216ENST00000490796 PTTG1O95997 202 aa13.22□□□□□ -0.29
SREBF1-216ENST00000490796 SMR3BP02814 79 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-216ENST00000490796 ASIPP42127 132 aa13.22□□□□□ -0.29
SREBF1-216ENST00000490796 FAM229AH3BQW9 127 aa13.21□□□□□ -0.29
SREBF1-216ENST00000490796 ZFP2Q6ZN57 461 aa13.21□□□□□ -0.29
SREBF1-216ENST00000490796 FXYD6-FXYD2A0A087WZ82 144 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 CTXND1A0A1B0GTU2 59 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 GAGE12JA6NER3 117 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-216ENST00000490796 UBE2G2P60604 165 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 GAGE1Q13065 139 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 GAGE4Q13068 117 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 GAGE5Q13069 117 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 GAGE13Q4V321 117 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 RPL7L1Q6DKI1 246 aaKnown RBP13.2□□□□□ -0.3
SREBF1-216ENST00000490796 Q8N814 137 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 PARLQ9H300 379 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 ARL2-SNX15V9GYD0 113 aa13.2□□□□□ -0.3
SREBF1-216ENST00000490796 LAGE3Q14657 143 aa13.19□□□□□ -0.3
SREBF1-216ENST00000490796 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
SREBF1-216ENST00000490796 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
SREBF1-216ENST00000490796 OR2T35Q8NGX2 323 aa13.19□□□□□ -0.3
SREBF1-216ENST00000490796 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
SREBF1-216ENST00000490796 NKX6-2Q9C056 277 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-216ENST00000490796 IGKV3D-20A0A0C4DH25 116 aa13.18□□□□□ -0.3
SREBF1-216ENST00000490796 B4DEV8 164 aa13.18□□□□□ -0.3
SREBF1-216ENST00000490796 PEX7O00628 323 aa13.18□□□□□ -0.3
SREBF1-216ENST00000490796 Q5BKY6 102 aa13.18□□□□□ -0.3
SREBF1-216ENST00000490796 AKR1C8PQ5T2L2 129 aa13.18□□□□□ -0.3
SREBF1-216ENST00000490796 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
SREBF1-216ENST00000490796 FGF8P55075 233 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-216ENST00000490796 HAMPP81172 84 aa13.17□□□□□ -0.3
SREBF1-216ENST00000490796 TOR2AQ5JU69 321 aa13.17□□□□□ -0.3
SREBF1-216ENST00000490796 Q6ZSN1 163 aa13.17□□□□□ -0.3
SREBF1-216ENST00000490796 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
SREBF1-216ENST00000490796 A0A087WWC5 75 aa13.16□□□□□ -0.3
SREBF1-216ENST00000490796 H3BVH4 76 aa13.16□□□□□ -0.3
SREBF1-216ENST00000490796 Q86TA4 180 aa13.16□□□□□ -0.3
SREBF1-216ENST00000490796 IL36BQ9NZH7 164 aa13.16□□□□□ -0.3
SREBF1-216ENST00000490796 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
SREBF1-216ENST00000490796 M0R036 132 aa13.15□□□□□ -0.3
SREBF1-216ENST00000490796 RHODO00212 210 aa13.15□□□□□ -0.3
SREBF1-216ENST00000490796 UBE2G1P62253 170 aa13.15□□□□□ -0.3
SREBF1-216ENST00000490796 OR11H4Q8NGC9 324 aa13.15□□□□□ -0.3
SREBF1-216ENST00000490796 URGCP-MRPS24S4R325 110 aa13.15□□□□□ -0.3
SREBF1-216ENST00000490796 FAM74A7A6NL05 159 aa13.14□□□□□ -0.31
SREBF1-216ENST00000490796 ZNF726P1Q15940 193 aa13.14□□□□□ -0.31
SREBF1-216ENST00000490796 JPT2Q9H910 190 aa13.14□□□□□ -0.31
SREBF1-216ENST00000490796 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
SREBF1-216ENST00000490796 FLG2Q5D862 2391 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-216ENST00000490796 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
SREBF1-216ENST00000490796 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
SREBF1-216ENST00000490796 FAM74A4Q5TZK3 123 aa13.13□□□□□ -0.31
SREBF1-216ENST00000490796 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
SREBF1-216ENST00000490796 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
SREBF1-216ENST00000490796 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 KRBOX1C9JBD0 128 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 SH2D1AO60880 128 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 SEC11BP0C7V7 166 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
SREBF1-216ENST00000490796 DAZ4Q86SG3 579 aaKnown RBP13.12□□□□□ -0.31
SREBF1-216ENST00000490796 Q8N3U1 123 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 C14orf178Q8N769 122 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-216ENST00000490796 STOML3Q8TAV4 291 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 RMI2Q96E14 147 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 FMC1Q96HJ9 113 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 DAZ3Q9NR90 486 aaKnown RBP13.12□□□□□ -0.31
SREBF1-216ENST00000490796 COX11Q9Y6N1 276 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 HERC1Q15751 4861 aa13.12□□□□□ -0.31
SREBF1-216ENST00000490796 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms