RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 UBE2G2P60604 165 aa18.73■□□□□ 0.59
HOXB3-211ENST00000490677 NHLRC2Q8NBF2 726 aa18.73■□□□□ 0.59
HOXB3-211ENST00000490677 CRYGDP07320 174 aa18.72■□□□□ 0.59
HOXB3-211ENST00000490677 Q86TA4 180 aa18.72■□□□□ 0.59
HOXB3-211ENST00000490677 PEX7O00628 323 aa18.71■□□□□ 0.59
HOXB3-211ENST00000490677 RHOHQ15669 191 aa18.71■□□□□ 0.59
HOXB3-211ENST00000490677 Q6ZSN1 163 aa18.71■□□□□ 0.59
HOXB3-211ENST00000490677 IGHV3-38A0A0C4DH36 116 aa18.7■□□□□ 0.58
HOXB3-211ENST00000490677 CRIP1P50238 77 aa18.7■□□□□ 0.58
HOXB3-211ENST00000490677 LINC01556Q5JQF7 62 aa18.7■□□□□ 0.58
HOXB3-211ENST00000490677 CDPF1Q6NVV7 123 aa18.7■□□□□ 0.58
HOXB3-211ENST00000490677 SCRT2Q9NQ03 307 aa18.7■□□□□ 0.58
HOXB3-211ENST00000490677 COX8CQ7Z4L0 72 aa18.69■□□□□ 0.58
HOXB3-211ENST00000490677 C10orf126Q8N4M7 172 aa18.69■□□□□ 0.58
HOXB3-211ENST00000490677 PARLQ9H300 379 aa18.69■□□□□ 0.58
HOXB3-211ENST00000490677 IFNA7P01567 189 aa18.68■□□□□ 0.58
HOXB3-211ENST00000490677 PPT1P50897 306 aa18.68■□□□□ 0.58
HOXB3-211ENST00000490677 AKR1C8PQ5T2L2 129 aa18.68■□□□□ 0.58
HOXB3-211ENST00000490677 PRADC1Q9BSG0 188 aa18.68■□□□□ 0.58
HOXB3-211ENST00000490677 FABP5P3A8MUU1 101 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 EREGO14944 169 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 ARPC5O15511 151 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 LINC00694P0DN24 101 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 MGST1P10620 155 aaKnown RBP18.67■□□□□ 0.58
HOXB3-211ENST00000490677 RGS21Q2M5E4 152 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 PIK3CD-AS1Q5SR53 167 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 UFSP1Q6NVU6 142 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 HIST1H2BAQ96A08 127 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 ZC2HC1AQ96GY0 325 aa18.67■□□□□ 0.58
HOXB3-211ENST00000490677 DNAH8Q96JB1 4490 aa18.66■□□□□ 0.58
HOXB3-211ENST00000490677 MAP1LC3B2A6NCE7 125 aa18.66■□□□□ 0.58
HOXB3-211ENST00000490677 NKX6-2Q9C056 277 aaPredicted RBP18.66■□□□□ 0.58
HOXB3-211ENST00000490677 MAP1LC3BQ9GZQ8 125 aa18.66■□□□□ 0.58
HOXB3-211ENST00000490677 Q9UF83 564 aa18.66■□□□□ 0.58
HOXB3-211ENST00000490677 IBA57-AS1B1ANH7 110 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 SMLR1H3BR10 107 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 XGP55808 180 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 KRTAP10-1P60331 282 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 DNLZQ5SXM8 178 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 ZFP2Q6ZN57 461 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 JPT2Q9H910 190 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 IL36BQ9NZH7 164 aa18.65■□□□□ 0.58
HOXB3-211ENST00000490677 LRCOL1A6NCL2 159 aa18.64■□□□□ 0.57
HOXB3-211ENST00000490677 LELP1Q5T871 98 aa18.64■□□□□ 0.57
HOXB3-211ENST00000490677 VPS13BQ7Z7G8 4022 aa18.64■□□□□ 0.57
HOXB3-211ENST00000490677 KRBOX1C9JBD0 128 aa18.63■□□□□ 0.57
HOXB3-211ENST00000490677 FHITP49789 147 aa18.63■□□□□ 0.57
HOXB3-211ENST00000490677 SAMD10Q9BYL1 202 aa18.63■□□□□ 0.57
HOXB3-211ENST00000490677 GTSF1LQ9H1H1 148 aa18.63■□□□□ 0.57
HOXB3-211ENST00000490677 A8MWV9 139 aa18.62■□□□□ 0.57
HOXB3-211ENST00000490677 ASIPP42127 132 aa18.62■□□□□ 0.57
HOXB3-211ENST00000490677 ATP6V0E2Q8NHE4 81 aa18.62■□□□□ 0.57
HOXB3-211ENST00000490677 TRAV8-6A0A0B4J262 113 aa18.61■□□□□ 0.57
HOXB3-211ENST00000490677 B4DEV8 164 aa18.61■□□□□ 0.57
HOXB3-211ENST00000490677 H3BVH4 76 aa18.61■□□□□ 0.57
HOXB3-211ENST00000490677 SH2D1AO60880 128 aa18.61■□□□□ 0.57
HOXB3-211ENST00000490677 OR10J3Q5JRS4 329 aa18.61■□□□□ 0.57
HOXB3-211ENST00000490677 ZFP30Q9Y2G7 519 aa18.61■□□□□ 0.57
HOXB3-211ENST00000490677 TRBV6-1A0A0K0K1D8 114 aa18.6■□□□□ 0.57
HOXB3-211ENST00000490677 S100A4P26447 101 aaKnown RBP18.6■□□□□ 0.57
HOXB3-211ENST00000490677 DMRTA1Q5VZB9 504 aa18.6■□□□□ 0.57
HOXB3-211ENST00000490677 LGALSLQ3ZCW2 172 aaPredicted RBP18.59■□□□□ 0.57
HOXB3-211ENST00000490677 Q8N3U1 123 aa18.59■□□□□ 0.57
HOXB3-211ENST00000490677 KCNRGQ8N5I3 272 aa18.59■□□□□ 0.57
HOXB3-211ENST00000490677 FMC1Q96HJ9 113 aa18.59■□□□□ 0.57
HOXB3-211ENST00000490677 M0R036 132 aa18.58■□□□□ 0.56
HOXB3-211ENST00000490677 LTAP01374 205 aa18.58■□□□□ 0.56
HOXB3-211ENST00000490677 ZNF345Q14585 488 aa18.58■□□□□ 0.56
HOXB3-211ENST00000490677 ZNF674Q2M3X9 581 aa18.58■□□□□ 0.56
HOXB3-211ENST00000490677 C14orf178Q8N769 122 aaPredicted RBP18.58■□□□□ 0.56
HOXB3-211ENST00000490677 OR11H4Q8NGC9 324 aa18.58■□□□□ 0.56
HOXB3-211ENST00000490677 BOLA1Q9Y3E2 137 aa18.58■□□□□ 0.56
HOXB3-211ENST00000490677 IGHV3-30P01768 117 aa18.57■□□□□ 0.56
HOXB3-211ENST00000490677 IGHV3-33P01772 117 aa18.57■□□□□ 0.56
HOXB3-211ENST00000490677 ARMS2P0C7Q2 107 aa18.57■□□□□ 0.56
HOXB3-211ENST00000490677 IGHV3-30-3P0DP02 117 aa18.57■□□□□ 0.56
HOXB3-211ENST00000490677 IGHV3-30-5P0DP03 117 aa18.57■□□□□ 0.56
HOXB3-211ENST00000490677 TCEAL7Q9BRU2 100 aa18.57■□□□□ 0.56
HOXB3-211ENST00000490677 GRIFINA4D1Z8 144 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 GAGE12JA6NER3 117 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 GAGE1Q13065 139 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 GAGE4Q13068 117 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 GAGE5Q13069 117 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 LINC01559Q495D7 138 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 GAGE13Q4V321 117 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 FAM162BQ5T6X4 162 aa18.56■□□□□ 0.56
HOXB3-211ENST00000490677 MBD3L1Q8WWY6 194 aa18.54■□□□□ 0.56
HOXB3-211ENST00000490677 Q9HAA7 133 aa18.54■□□□□ 0.56
HOXB3-211ENST00000490677 PAGE4O60829 102 aa18.53■□□□□ 0.56
HOXB3-211ENST00000490677 SEC11BP0C7V7 166 aa18.53■□□□□ 0.56
HOXB3-211ENST00000490677 UBE2G1P62253 170 aa18.53■□□□□ 0.56
HOXB3-211ENST00000490677 LAGE3Q14657 143 aa18.53■□□□□ 0.56
HOXB3-211ENST00000490677 CST9LP1Q5W188 147 aa18.53■□□□□ 0.56
HOXB3-211ENST00000490677 HMSDA8MTL9 139 aa18.52■□□□□ 0.56
HOXB3-211ENST00000490677 GCSHP23434 173 aa18.52■□□□□ 0.56
HOXB3-211ENST00000490677 STOML3Q8TAV4 291 aa18.52■□□□□ 0.56
HOXB3-211ENST00000490677 SFRP2Q96HF1 295 aa18.52■□□□□ 0.56
HOXB3-211ENST00000490677 PSCAO43653 123 aa18.51■□□□□ 0.55
HOXB3-211ENST00000490677 RHODO00212 210 aa18.5■□□□□ 0.55
HOXB3-211ENST00000490677 Q8N814 137 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms