RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 ISOC2Q96AB3 205 aa12.09□□□□□ -0.47
RAPGEF3-212ENST00000490387 SCRT2Q9NQ03 307 aa12.09□□□□□ -0.47
RAPGEF3-212ENST00000490387 OR2D3Q8NGH3 330 aa12.08□□□□□ -0.48
RAPGEF3-212ENST00000490387 RASL10AQ92737 203 aa12.08□□□□□ -0.48
RAPGEF3-212ENST00000490387 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
RAPGEF3-212ENST00000490387 H3BVH4 76 aa12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 M0R2P5 195 aa12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 Q6ZTC4 211 aa12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 PTH2Q96A98 100 aa12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 SSBP4Q9BWG4 385 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 RPP21Q9H633 154 aaKnown RBP12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 OSTCQ9NRP0 149 aa12.07□□□□□ -0.48
RAPGEF3-212ENST00000490387 TRGV1A0A0A0MS02 117 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 SNAI2O43623 268 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 ARMS2P0C7Q2 107 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 IGLC6P0CF74 106 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 DEFB130BP0DP73 79 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 DEFB130AP0DP74 79 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 ERVFC1-1P60608 527 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 DAD1P61803 113 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 ADIRFQ15847 76 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 MRPL16Q9NX20 251 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 NACAE9PAV3 2078 aa12.06□□□□□ -0.48
RAPGEF3-212ENST00000490387 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 GAGE7O76087 117 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 GZMBP10144 247 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 CT83Q5H943 113 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 SFRP2Q96HF1 295 aa12.05□□□□□ -0.48
RAPGEF3-212ENST00000490387 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 NXPH4O95158 308 aa12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 C10orf91Q5T1B1 145 aa12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 EPPK1P58107 5090 aaKnown RBP12.04□□□□□ -0.48
RAPGEF3-212ENST00000490387 XKRY2A2RUG3 117 aa12.03□□□□□ -0.48
RAPGEF3-212ENST00000490387 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-212ENST00000490387 LGALS9CQ6DKI2 356 aa12.03□□□□□ -0.48
RAPGEF3-212ENST00000490387 POM121L12Q8N7R1 296 aa12.03□□□□□ -0.48
RAPGEF3-212ENST00000490387 V9GYV3 84 aa12.03□□□□□ -0.48
RAPGEF3-212ENST00000490387 F8W036 122 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 CTRLP40313 264 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 ZNF876PQ49A33 203 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 C15orf54Q8N8G6 183 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
RAPGEF3-212ENST00000490387 TRGV2A0A075B6R0 118 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 TRAV10A0A0B4J240 114 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 A8MWL6 223 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 ATP5G1P05496 136 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 TCTAP57738 103 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 OR10G8Q8NGN5 311 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 CARHSP1Q9Y2V2 147 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 PHLDA3Q9Y5J5 127 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 KMT2AQ03164 3969 aa12.01□□□□□ -0.49
RAPGEF3-212ENST00000490387 A0A1W2PPQ1 181 aa12□□□□□ -0.49
RAPGEF3-212ENST00000490387 IGLL5B9A064 214 aa12□□□□□ -0.49
RAPGEF3-212ENST00000490387 TSKUQ8WUA8 353 aa12□□□□□ -0.49
RAPGEF3-212ENST00000490387 CNFNQ9BYD5 112 aa12□□□□□ -0.49
RAPGEF3-212ENST00000490387 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
RAPGEF3-212ENST00000490387 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
RAPGEF3-212ENST00000490387 FOXA3P55318 350 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-212ENST00000490387 ZFP82Q8N141 532 aa11.99□□□□□ -0.49
RAPGEF3-212ENST00000490387 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
RAPGEF3-212ENST00000490387 IGHV4-4A0A075B6R2 117 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 FAM231BA6NCW3 169 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 F2Z2F3 143 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 RS1O15537 224 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 HOXA5P20719 270 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 CFAP126Q5VTH2 177 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 LYZL1Q6UWQ5 148 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 SLC7A5P1Q8MH63 180 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 SYT8Q8NBV8 401 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 ZNF479Q96JC4 524 aa11.98□□□□□ -0.49
RAPGEF3-212ENST00000490387 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 M0R381 172 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 RNF212Q495C1 297 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 UFSP1Q6NVU6 142 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 JPT2Q9H910 190 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 APLNQ9ULZ1 77 aa11.97□□□□□ -0.49
RAPGEF3-212ENST00000490387 SMIM27A0A1W2PRY6 76 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 A8MWV9 139 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 IGHV3-53P01767 116 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 HTN3P15516 51 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 CACNG7P62955 275 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 FHL2Q14192 279 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 WDR73Q6P4I2 378 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 OR4C5Q8NGB2 326 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 TPPP3Q9BW30 176 aa11.96□□□□□ -0.49
RAPGEF3-212ENST00000490387 BIRC6Q9NR09 4857 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms