RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 ZNF705BP0CI00 300 aaPredicted RBP3.3□□□□□ -1.88
RBM39-235ENST00000490354 S100PP25815 95 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 TSPOP30536 169 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 LEPP41159 167 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 ZNF80P51504 273 aaPredicted RBP3.3□□□□□ -1.88
RBM39-235ENST00000490354 FOXA3P55318 350 aaPredicted RBP3.3□□□□□ -1.88
RBM39-235ENST00000490354 DEFB1P60022 68 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 ACTL10Q5JWF8 245 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 PRR27Q6MZM9 219 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 KCNIP4Q6PIL6 250 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 AMTNQ6UX39 209 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.3□□□□□ -1.88
RBM39-235ENST00000490354 TSKUQ8WUA8 353 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 BTF3L4Q96K17 158 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 PYGO2Q9BRQ0 406 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 GFRA4Q9GZZ7 299 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 RPP21Q9H633 154 aaKnown RBP3.3□□□□□ -1.88
RBM39-235ENST00000490354 IL36BQ9NZH7 164 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 TENM1Q9UKZ4 2725 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 COL6A5A8TX70 2615 aa3.3□□□□□ -1.88
RBM39-235ENST00000490354 TRAV21A0A0B4J279 112 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 SMIM27A0A1W2PRY6 76 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 XKRY2A2RUG3 117 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 TMEM189A5PLL7 270 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 KNCNA6PVL3 124 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 A8MWL6 223 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 ZNF324O75467 553 aaPredicted RBP3.29□□□□□ -1.88
RBM39-235ENST00000490354 CA1P00915 261 aaPredicted RBP3.29□□□□□ -1.88
RBM39-235ENST00000490354 TYMSP04818 313 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 GPX1P07203 203 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 CD7P09564 240 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 IGLL1P15814 213 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 CDKN1BP46527 198 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 FAM3BP58499 235 aaPredicted RBP3.29□□□□□ -1.88
RBM39-235ENST00000490354 RPS20P60866 119 aaKnown RBP3.29□□□□□ -1.88
RBM39-235ENST00000490354 ELOBQ15370 118 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 PRR9Q5T870 116 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 Q6AWC8 147 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 OR2D3Q8NGH3 330 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 ZMAT5Q9UDW3 170 aaKnown RBP3.29□□□□□ -1.88
RBM39-235ENST00000490354 NAT8BQ9UHF3 227 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 STAB1Q9NY15 2570 aa3.29□□□□□ -1.88
RBM39-235ENST00000490354 DNHD1Q96M86 4753 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 IGKV3D-20A0A0C4DH25 116 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 A0A1W2PPQ1 181 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 C7orf71A4D174 169 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 RBMY1BA6NDE4 496 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 RBMY1EA6NEQ0 496 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 AMBPP02760 352 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 ORM1P02763 201 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 CXCL1P09341 107 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 RBMY1DP0C7P1 496 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 RAB5AP20339 215 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 RNASE4P34096 147 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 NUTF2P61970 127 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 RPL19P84098 196 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 TDRG1Q3Y452 100 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 ATP5L2Q7Z4Y8 100 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 TRPT1Q86TN4 253 aaKnown RBP3.28□□□□□ -1.88
RBM39-235ENST00000490354 GTSCR1Q86UQ5 136 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 STHQ8IWL8 128 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 NUP35Q8NFH5 326 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 FAM210BQ96KR6 192 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 URGCP-MRPS24S4R325 110 aa3.28□□□□□ -1.88
RBM39-235ENST00000490354 TMSB15BA0A087X1C1 80 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 TGIF2-C20orf24A0A0A6YYL0 155 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 A0A1B0GW15 77 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 HIGD1CA8MV81 97 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 F2Z2F3 143 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 J3KRW8 73 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 M0R2Z0 102 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 CRXO43186 299 aaPredicted RBP3.27□□□□□ -1.89
RBM39-235ENST00000490354 S100A8P05109 93 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 IGLC6P0CF74 106 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 CFC1BP0CG36 223 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 CFC1P0CG37 223 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 TCL1AP56279 114 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 EGFEM1PQ0D2K5 195 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 SPINK13Q1W4C9 94 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 COX19Q49B96 90 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 DNLZQ5SXM8 178 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 WDR73Q6P4I2 378 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 MORN3Q6PF18 240 aaPredicted RBP3.27□□□□□ -1.89
RBM39-235ENST00000490354 RASL11AQ6T310 242 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 FAM159AQ6UWV7 190 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 Q6ZQT7 251 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 DEFB125Q8N687 156 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 KCNS1Q96KK3 526 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 C20orf144Q9BQM9 153 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 LINC00467Q9BRT7 94 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 SRD5A3Q9H8P0 318 aa3.27□□□□□ -1.89
RBM39-235ENST00000490354 VWFP04275 2813 aa3.26□□□□□ -1.89
RBM39-235ENST00000490354 IGLV5-37A0A075B6J1 123 aa3.26□□□□□ -1.89
RBM39-235ENST00000490354 IGHV4-4A0A075B6R2 117 aa3.26□□□□□ -1.89
RBM39-235ENST00000490354 TRAV12-2A0A075B6T6 113 aa3.26□□□□□ -1.89
RBM39-235ENST00000490354 IGHV1OR15-1A0A075B7D0 117 aa3.26□□□□□ -1.89
RBM39-235ENST00000490354 TRAV12-3A0A0B4J271 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms