RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 PHLDA3Q9Y5J5 127 aa7.67□□□□□ -1.18
VPS13D-210ENST00000489961 TRAV4A0A0B4J268 109 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 C9JQL5 133 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 K7EN84 100 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 IGHV3-53P01767 116 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 TMEM241Q24JQ0 296 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 SOHLH1Q5JUK2 328 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 PIK3CD-AS1Q5SR53 167 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 TMEM88Q6PEY1 159 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 NUDT10Q8NFP7 164 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 OR4C5Q8NGB2 326 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 NUDT11Q96G61 164 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 MUC4Q99102 2169 aa7.66□□□□□ -1.18
VPS13D-210ENST00000489961 TRGV4A0A0C4DH28 118 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 HOXA5P20719 270 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 SLAQ13239 276 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 LINC01551Q86U37 167 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 ZNF575Q86XF7 245 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 ZFP82Q8N141 532 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 C15orf53Q8NAA6 179 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 RNASE7Q9H1E1 156 aaKnown RBP7.65□□□□□ -1.18
VPS13D-210ENST00000489961 RPP21Q9H633 154 aaKnown RBP7.65□□□□□ -1.18
VPS13D-210ENST00000489961 SCRT2Q9NQ03 307 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 NAT8Q9UHE5 227 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
VPS13D-210ENST00000489961 TRAV26-1A0A087WT03 109 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 A8MWV9 139 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 M0R381 172 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 RS1O15537 224 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 GATCO43716 136 aaKnown RBP7.64□□□□□ -1.19
VPS13D-210ENST00000489961 CIDEAO60543 219 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 OR5AL1P0C617 328 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 SFTA3P0C7M3 94 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 ERVFC1-1P60608 527 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 FAM231DQ6ZW35 169 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 ZNF479Q96JC4 524 aa7.64□□□□□ -1.19
VPS13D-210ENST00000489961 A0A0J9YY99 117 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 H3BNG1 76 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 SNAI2O43623 268 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 GZMBP10144 247 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 FHL2Q14192 279 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 SPANXN1Q5VSR9 72 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 CFAP126Q5VTH2 177 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 POM121L12Q8N7R1 296 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 TPPP3Q9BW30 176 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 SSBP4Q9BWG4 385 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-210ENST00000489961 PRO0255Q9UI72 69 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
VPS13D-210ENST00000489961 A0A1W2PPQ1 181 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 PAX4O43316 350 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 NUDT3O95989 172 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
VPS13D-210ENST00000489961 ADIRFQ15847 76 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 UQCC3Q6UW78 93 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 C15orf54Q8N8G6 183 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 OR10AG1Q8NH19 301 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 OSTCQ9NRP0 149 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
VPS13D-210ENST00000489961 NACAE9PAV3 2078 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 LCE6AA0A183 80 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 A8MWL6 223 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 F2Z2F3 143 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 RHODO00212 210 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 NXPH4O95158 308 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 CRYBA4P53673 196 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 CACNG7P62955 275 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 CT83Q5H943 113 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 LINC00476Q8WZB0 136 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 ISOC2Q96AB3 205 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 SFRP2Q96HF1 295 aa7.61□□□□□ -1.19
VPS13D-210ENST00000489961 IGHV3-73A0A0B4J1V6 119 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 LY6G6CO95867 125 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 P0DMU3 169 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 FAM231AP0DMU4 169 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 FAM231CP0DMU5 169 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 GATA1P15976 413 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-210ENST00000489961 SSTP61278 116 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 LGALS9CQ6DKI2 356 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 ZFP2Q6ZN57 461 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 COMMD7Q86VX2 200 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 VSIG2Q96IQ7 327 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 JPT2Q9H910 190 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 TENM2Q9NT68 2774 aa7.6□□□□□ -1.19
VPS13D-210ENST00000489961 LINC00862A6NCI5 91 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 CTRLP40313 264 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 FAM74A4Q5TZK3 123 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 WDR73Q6P4I2 378 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 UBE2DNLQ8IWF7 75 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 OR10G8Q8NGN5 311 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 AP1S3Q96PC3 154 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 PRADC1Q9BSG0 188 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 ICOSQ9Y6W8 199 aa7.59□□□□□ -1.19
VPS13D-210ENST00000489961 STARD9Q9P2P6 4700 aa7.58□□□□□ -1.2
VPS13D-210ENST00000489961 A0A087WWL8 130 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms