RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 Q8TAT8 98 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 THAP6Q8TBB0 222 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 PHYHIPLQ96FC7 376 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 PAXXQ9BUH6 204 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 WDR61Q9GZS3 305 aaKnown RBP4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 GPN1Q9HCN4 374 aaPredicted RBP4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 PTTG2Q9NZH5 202 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 TRAV4A0A0B4J268 109 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 IFNA5P01569 189 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 OR10J4P0C629 311 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 EVI2AP22794 236 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 SRIP30626 198 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 RANP62826 216 aaKnown RBP4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 ARL6IP6Q8N6S5 226 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 OR5C1Q8NGR4 320 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 TVP23CQ96ET8 276 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 CCDC32Q9BV29 185 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 NMES1Q9C002 83 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 OR5AC2Q9NZP5 309 aa4.24□□□□□ -1.73
PRPF40A-210ENST00000489741 IGHV3-16A0A0C4DH30 117 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 LOC100131303A0A0U1RQF7 123 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 IBA57-AS1B1ANH7 110 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 M0R2P5 195 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 GNRH2O43555 120 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 SIX6O95475 246 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 SMR3BP02814 79 aaPredicted RBP4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 CRYGDP07320 174 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 GATA1P15976 413 aaPredicted RBP4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 CSN1S1P47710 185 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 TMEM183BQ1AE95 376 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 LINC01556Q5JQF7 62 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 SH2D6Q7Z4S9 175 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 TMEM183AQ8IXX5 376 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 FRZBQ92765 325 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 TXNDC17Q9BRA2 123 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 TMEM70Q9BUB7 260 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 SLC25A31Q9H0C2 315 aa4.23□□□□□ -1.73
PRPF40A-210ENST00000489741 IGHV3-38A0A0C4DH36 116 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 C9JCJ5 164 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 OR7C2O60412 319 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 C1QBP02746 253 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 PRSS1P07477 247 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 CFC1P0CG37 223 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 H2BFSP57053 126 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 ASAH1Q13510 395 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 FAM159AQ6UWV7 190 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 PQLC2Q6ZP29 291 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 LINC00299Q6ZSB3 139 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 OR4C5Q8NGB2 326 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 OTORQ9NRC9 128 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 KCNIP2Q9NS61 270 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 NDUFA13Q9P0J0 144 aa4.22□□□□□ -1.73
PRPF40A-210ENST00000489741 TRAV21A0A0B4J279 112 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 PGPA6NDG6 321 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 C17orf112F2Z3M2 114 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 VCYO14598 125 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 RS1O15537 224 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 CIDEAO60543 219 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 TYMSP04818 313 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 MZT2BQ6NZ67 158 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 DPPA3Q6W0C5 159 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 Q6ZSA8 131 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 Q8N814 137 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 SLC25A29Q8N8R3 303 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 PCNPQ8WW12 178 aaKnown RBP4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 PTH2Q96A98 100 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 ATP5SQ99766 215 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 MBD2Q9UBB5 411 aa4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 LRP1Q07954 4544 aaKnown RBP4.21□□□□□ -1.74
PRPF40A-210ENST00000489741 TRBV6-4A0A1B0GX49 114 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 EIF3GO75821 320 aaKnown RBP eCLIP4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 PFN1P07737 140 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 TAS2R45P59539 299 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 UBE2L3P68036 154 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 HAMPP81172 84 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 IFITM3Q01628 133 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 LRRC37A5PQ49AS3 106 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 KHDC3LQ587J8 217 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 FFAR4Q5NUL3 377 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 LELP1Q5T871 98 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 CFAP126Q5VTH2 177 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 SUN5Q8TC36 379 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 PPP1R1CQ8WVI7 109 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 WFDC1Q9HC57 220 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 HSPB11Q9Y547 144 aa4.2□□□□□ -1.74
PRPF40A-210ENST00000489741 TRAV8-1A0A0A6YYK1 113 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 MPC2O95563 127 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 ZNF80P51504 273 aaPredicted RBP4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 WFDC2Q14508 124 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 LAGE3Q14657 143 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 ZNF876PQ49A33 203 aa4.19□□□□□ -1.74
PRPF40A-210ENST00000489741 GOLT1AQ6ZVE7 132 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms