RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ZMAT4Q9H898 229 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 ZANQ9Y493 2812 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 F6UB75 175 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
COL9A1-208ENST00000489611 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
COL9A1-208ENST00000489611 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 J3KRW8 73 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 K7EQG2 157 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 CD5LO43866 347 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 NUDT3O95989 172 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 PRSS1P07477 247 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
COL9A1-208ENST00000489611 MPV17L2Q567V2 206 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 Q6ZQT7 251 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
COL9A1-208ENST00000489611 C7orf71A4D174 169 aa11.21□□□□□ -0.61
COL9A1-208ENST00000489611 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
COL9A1-208ENST00000489611 TFPI2P48307 235 aa11.21□□□□□ -0.61
COL9A1-208ENST00000489611 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.61
COL9A1-208ENST00000489611 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
COL9A1-208ENST00000489611 TMEM86BQ8N661 226 aa11.21□□□□□ -0.61
COL9A1-208ENST00000489611 COX11Q9Y6N1 276 aa11.21□□□□□ -0.61
COL9A1-208ENST00000489611 A0A0J9YX75 114 aa11.21□□□□□ -0.62
COL9A1-208ENST00000489611 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.62
COL9A1-208ENST00000489611 FXYD7P58549 80 aa11.21□□□□□ -0.62
COL9A1-208ENST00000489611 ODF1Q14990 250 aa11.21□□□□□ -0.62
COL9A1-208ENST00000489611 BVES-AS1Q5T3Y7 98 aa11.21□□□□□ -0.62
COL9A1-208ENST00000489611 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
COL9A1-208ENST00000489611 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
COL9A1-208ENST00000489611 CREBBPQ92793 2442 aa11.2□□□□□ -0.62
COL9A1-208ENST00000489611 AKAP9Q99996 3911 aa11.2□□□□□ -0.62
COL9A1-208ENST00000489611 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 DPM2O94777 84 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 IGKCP01834 107 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 HLA-DRB4P13762 266 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 SEC11AP67812 179 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 ANKRD39Q53RE8 183 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 IGHV4OR15-8A0A075B7B6 117 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 A0A087WW49 117 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.19□□□□□ -0.62
COL9A1-208ENST00000489611 GNRH2O43555 120 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 FGF6P10767 208 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 SRD5A1P18405 259 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 HOXD3P31249 432 aaPredicted RBP11.19□□□□□ -0.62
COL9A1-208ENST00000489611 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
COL9A1-208ENST00000489611 C14orf178Q8N769 122 aaPredicted RBP11.19□□□□□ -0.62
COL9A1-208ENST00000489611 TRAV12-1A0A0B4J245 112 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 PLNP26678 52 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 CDKN1BP46527 198 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 DEFB1P60022 68 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 KRTAP1-1Q07627 177 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 FOXI2Q6ZQN5 318 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 RASL10AQ92737 203 aa11.18□□□□□ -0.62
COL9A1-208ENST00000489611 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
COL9A1-208ENST00000489611 C2orf91Q6ZV80 131 aa11.17□□□□□ -0.62
COL9A1-208ENST00000489611 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
COL9A1-208ENST00000489611 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
COL9A1-208ENST00000489611 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
COL9A1-208ENST00000489611 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
COL9A1-208ENST00000489611 A0A087WX48 190 aa11.16□□□□□ -0.62
COL9A1-208ENST00000489611 CD7P09564 240 aa11.16□□□□□ -0.62
COL9A1-208ENST00000489611 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
COL9A1-208ENST00000489611 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
COL9A1-208ENST00000489611 KIF25-AS1Q9Y6Z4 181 aa11.16□□□□□ -0.62
COL9A1-208ENST00000489611 MGPP08493 103 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 EDN2P20800 178 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 HSD52Q0P140 79 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 A6NDN8 102 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 HIGD1BQ9P298 99 aa11.15□□□□□ -0.62
COL9A1-208ENST00000489611 TEX15Q9BXT5 2789 aa11.14□□□□□ -0.63
COL9A1-208ENST00000489611 LINC01619G3V211 115 aa11.14□□□□□ -0.63
COL9A1-208ENST00000489611 H7C1H1 209 aa11.14□□□□□ -0.63
COL9A1-208ENST00000489611 ZNF124Q15973 351 aa11.14□□□□□ -0.63
COL9A1-208ENST00000489611 TCTEX1D4Q5JR98 221 aa11.14□□□□□ -0.63
COL9A1-208ENST00000489611 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
COL9A1-208ENST00000489611 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 IGHV3-16A0A0C4DH30 117 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 TRGV11A0A075B6L2 103 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 NPSP0C0P6 89 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 NMUP48645 174 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 LINC00315P59091 139 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 SMR3AQ99954 134 aa11.13□□□□□ -0.63
COL9A1-208ENST00000489611 FLNAP21333 2647 aaKnown RBP11.12□□□□□ -0.63
COL9A1-208ENST00000489611 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
COL9A1-208ENST00000489611 F8VRH5 84 aa11.12□□□□□ -0.63
COL9A1-208ENST00000489611 VCYO14598 125 aa11.12□□□□□ -0.63
COL9A1-208ENST00000489611 ERASQ7Z444 233 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms