RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 NANOS2P60321 138 aaKnown RBP7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 RBMY1FQ15415 496 aaKnown RBP7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 COA6Q5JTJ3 125 aaKnown RBP7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 TMEM78Q5T7P6 136 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 PRR27Q6MZM9 219 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 Q6ZQT7 251 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 NHLRC2Q8NBF2 726 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 FRZBQ92765 325 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 BORCS7Q96B45 105 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 ZC2HC1AQ96GY0 325 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 M0R2Z0 102 aa7.61□□□□□ -1.19
SCAMP4-208ENST00000489554 SPINK13Q1W4C9 94 aa7.61□□□□□ -1.19
SCAMP4-208ENST00000489554 FAM162BQ5T6X4 162 aa7.61□□□□□ -1.19
SCAMP4-208ENST00000489554 XCL2Q9UBD3 114 aa7.61□□□□□ -1.19
SCAMP4-208ENST00000489554 X6R8D5 127 aa7.61□□□□□ -1.19
SCAMP4-208ENST00000489554 PLECQ15149 4684 aaKnown RBP7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 PHOX2AO14813 284 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 LY6G6CO95867 125 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 FOXA3P55318 350 aaPredicted RBP7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 FXYD7P58549 80 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 SMUG1Q53HV7 270 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 GFI1BQ5VTD9 330 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 ZNF575Q86XF7 245 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 MRPL18Q9H0U6 180 aaKnown RBP7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 C11orf21Q9P2W6 132 aa7.6□□□□□ -1.19
SCAMP4-208ENST00000489554 TRAV12-2A0A075B6T6 113 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 ZNF324O75467 553 aaPredicted RBP7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 SMIM6P0DI80 62 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 LEPP41159 167 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 CDKN1BP46527 198 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 TCTAP57738 103 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 RIGQ13278 110 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 OR2D3Q8NGH3 330 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 NEU1Q99519 415 aa7.59□□□□□ -1.19
SCAMP4-208ENST00000489554 SMIM9A6NGZ8 99 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 FABP5P3A8MUU1 101 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 HIGD1CA8MV81 97 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 J3KRW8 73 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 APCSP02743 223 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 RAB4BP61018 213 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 HBBP68871 147 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 OR10J3Q5JRS4 329 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 ZNF705AQ6ZN79 300 aaPredicted RBP7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 LINC00518Q8N0U6 118 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 NUP35Q8NFH5 326 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 TMEM18Q96B42 140 aa7.58□□□□□ -1.2
SCAMP4-208ENST00000489554 C7orf71A4D174 169 aa7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 TMEM189A5PLL7 270 aa7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 Q0VG73 95 aa7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 DMRTA1Q5VZB9 504 aa7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 LGALS9CQ6DKI2 356 aa7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 GOLT1BQ9Y3E0 138 aa7.57□□□□□ -1.2
SCAMP4-208ENST00000489554 HYDINQ4G0P3 5121 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 TRAV10A0A0B4J240 114 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 TRAV12-3A0A0B4J271 114 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 SH2D1AO60880 128 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 AMBPP02760 352 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 GPX1P07203 203 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 TSPOP30536 169 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 TCL1AP56279 114 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 DNLZQ5SXM8 178 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 Q6ZTC4 211 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 HIST3H2BBQ8N257 126 aa7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 PACRGQ96M98 296 aaPredicted RBP7.56□□□□□ -1.2
SCAMP4-208ENST00000489554 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 IGKV3D-20A0A0C4DH25 116 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 IGLL5B9A064 214 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 CELA1Q9UNI1 258 aa7.55□□□□□ -1.2
SCAMP4-208ENST00000489554 TRAV21A0A0B4J279 112 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 F2Z2F3 143 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 INSP01308 110 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 PRM2P04554 102 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 SPART-AS1P0CW21 52 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 C12orf74Q32Q52 190 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 C12orf57Q99622 126 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 C20orf144Q9BQM9 153 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 LINC00467Q9BRT7 94 aa7.54□□□□□ -1.2
SCAMP4-208ENST00000489554 SPINK4O60575 86 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 ESDP10768 282 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 S100A12P80511 92 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 TDRG1Q3Y452 100 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 ANXA2RQ3ZCQ2 193 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 PGLYRP4Q96LB8 373 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 TMEM208Q9BTX3 173 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
SCAMP4-208ENST00000489554 IGHV4-4A0A075B6R2 117 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 DEFB131BA0A096LNP1 70 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms