RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 RBMY1BA6NDE4 496 aaKnown RBP5.69□□□□□ -1.5
SMC6-209ENST00000489535 RBMY1EA6NEQ0 496 aaKnown RBP5.69□□□□□ -1.5
SMC6-209ENST00000489535 CD7P09564 240 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 RBMY1DP0C7P1 496 aaKnown RBP5.69□□□□□ -1.5
SMC6-209ENST00000489535 ARMS2P0C7Q2 107 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 CAMPP49913 170 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 INSL3P51460 131 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 FOXA3P55318 350 aaPredicted RBP5.69□□□□□ -1.5
SMC6-209ENST00000489535 RAB4BP61018 213 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 FABP9Q0Z7S8 132 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 MUC21Q5SSG8 566 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 GFI1BQ5VTD9 330 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 LYZL1Q6UWQ5 148 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 AMTNQ6UX39 209 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 TMEM136Q6ZRR5 245 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 STHQ8IWL8 128 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 FER1L6-AS1Q8NA97 138 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 TMEM158Q8WZ71 300 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 FRZBQ92765 325 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 TENM1Q9UKZ4 2725 aa5.69□□□□□ -1.5
SMC6-209ENST00000489535 A0A1B0GUT8 65 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 A0A1B0GXF2 115 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 MT-ND6P03923 174 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 IGLC6P0CF74 106 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 HBBP68871 147 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 RIGQ13278 110 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 ANXA2RQ3ZCQ2 193 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 RASL11AQ6T310 242 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 MCRIP2Q9BUT9 160 aaKnown RBP5.68□□□□□ -1.5
SMC6-209ENST00000489535 GNB1LQ9BYB4 327 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 WFDC10AQ9H1F0 79 aa5.68□□□□□ -1.5
SMC6-209ENST00000489535 ATRQ13535 2644 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 MUC21A0A0G2JKD1 596 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 MUC21A0A140T8X8 626 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 H3BVH4 76 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 PHOX2AO14813 284 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 ZNF324O75467 553 aaPredicted RBP5.67□□□□□ -1.5
SMC6-209ENST00000489535 IGLL1P15814 213 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 CTRLP40313 264 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 ASIPP42127 132 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 SSTP61278 116 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 FAM159AQ6UWV7 190 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 TRPT1Q86TN4 253 aaKnown RBP5.67□□□□□ -1.5
SMC6-209ENST00000489535 KCNS1Q96KK3 526 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 FAM110AQ9BQ89 295 aa5.67□□□□□ -1.5
SMC6-209ENST00000489535 JMJD1CQ15652 2540 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 IGHV1OR15-1A0A075B7D0 117 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 A0A1B0GW15 77 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 F2Z2F3 143 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 CRXO43186 299 aaPredicted RBP5.66□□□□□ -1.5
SMC6-209ENST00000489535 GNRH2O43555 120 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 SNAI2O43623 268 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BKO60814 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 INSP01308 110 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 APCSP02743 223 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 AMBPP02760 352 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 S100A8P05109 93 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 S100A6P06703 90 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BJP06899 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 RBMY1A1P0DJD3 496 aaKnown RBP5.66□□□□□ -1.5
SMC6-209ENST00000489535 RBMY1CP0DJD4 496 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BOP23527 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 S100A4P26447 101 aaKnown RBP5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BBP33778 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BDP58876 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BCP62807 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 RBMY1FQ15415 496 aaKnown RBP5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST2H2BEQ16778 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.66□□□□□ -1.5
SMC6-209ENST00000489535 DNLZQ5SXM8 178 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 GTSCR1Q86UQ5 136 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 WFDC9Q8NEX5 89 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BHQ93079 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BNQ99877 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 HIST1H2BMQ99879 126 aa5.66□□□□□ -1.5
SMC6-209ENST00000489535 TIMM8BQ9Y5J9 83 aaPredicted RBP5.66□□□□□ -1.5
SMC6-209ENST00000489535 DNAH3Q8TD57 4116 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 OR5AL1P0C617 328 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 RPL35AP18077 110 aaKnown RBP5.65□□□□□ -1.5
SMC6-209ENST00000489535 NTF3P20783 257 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 NDUFA6P56556 154 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 NUTF2P61970 127 aaKnown RBP5.65□□□□□ -1.5
SMC6-209ENST00000489535 CACNG7P62955 275 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 SLAQ13239 276 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 TWIST1Q15672 202 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 DEFB125Q8N687 156 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 GATD1Q8NB37 220 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 OR10AG1Q8NH19 301 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 TP53TG3Q9ULZ0 132 aa5.65□□□□□ -1.5
SMC6-209ENST00000489535 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.5
SMC6-209ENST00000489535 TRRAPQ9Y4A5 3859 aa5.65□□□□□ -1.51
SMC6-209ENST00000489535 TRGV11A0A075B6L2 103 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 CBY3A6NI87 242 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 SPRY2O43597 315 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 RNASE3P12724 160 aaKnown RBP5.64□□□□□ -1.51
SMC6-209ENST00000489535 TDRG1Q3Y452 100 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms