RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 SPANXN1Q5VSR9 72 aa13.26□□□□□ -0.29
CD40-206ENST00000489304 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
CD40-206ENST00000489304 AMN1Q8IY45 258 aa13.26□□□□□ -0.29
CD40-206ENST00000489304 HIST1H2BLQ99880 126 aa13.26□□□□□ -0.29
CD40-206ENST00000489304 C19orf73Q9NVV2 129 aa13.26□□□□□ -0.29
CD40-206ENST00000489304 MUC4Q99102 2169 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
CD40-206ENST00000489304 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 IGLL1P15814 213 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
CD40-206ENST00000489304 C9orf66Q5T8R8 295 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 SHISA2Q6UWI4 295 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 WFDC9Q8NEX5 89 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 WFDC10AQ9H1F0 79 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 TIMM8BQ9Y5J9 83 aaPredicted RBP13.25□□□□□ -0.29
CD40-206ENST00000489304 U3KQK5 164 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 IGHV3-16A0A0C4DH30 117 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 NXPH4O95158 308 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 AMBPP02760 352 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 MRPL51Q4U2R6 128 aaKnown RBP13.25□□□□□ -0.29
CD40-206ENST00000489304 PHLDA3Q9Y5J5 127 aa13.25□□□□□ -0.29
CD40-206ENST00000489304 FABP4P15090 132 aa13.24□□□□□ -0.29
CD40-206ENST00000489304 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
CD40-206ENST00000489304 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
CD40-206ENST00000489304 C20orf144Q9BQM9 153 aa13.24□□□□□ -0.29
CD40-206ENST00000489304 RAB4AP20338 218 aa13.23□□□□□ -0.29
CD40-206ENST00000489304 SMIM15Q7Z3B0 74 aa13.23□□□□□ -0.29
CD40-206ENST00000489304 Q8N1Y9 231 aa13.23□□□□□ -0.29
CD40-206ENST00000489304 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
CD40-206ENST00000489304 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
CD40-206ENST00000489304 TMEM18Q96B42 140 aa13.22□□□□□ -0.29
CD40-206ENST00000489304 LINC00467Q9BRT7 94 aa13.22□□□□□ -0.29
CD40-206ENST00000489304 TRGV11A0A075B6L2 103 aa13.22□□□□□ -0.29
CD40-206ENST00000489304 EVI2AP22794 236 aa13.22□□□□□ -0.29
CD40-206ENST00000489304 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
CD40-206ENST00000489304 D6R8Y8 96 aa13.21□□□□□ -0.3
CD40-206ENST00000489304 M0R381 172 aa13.21□□□□□ -0.3
CD40-206ENST00000489304 SPRY2O43597 315 aa13.21□□□□□ -0.3
CD40-206ENST00000489304 INSP01308 110 aa13.21□□□□□ -0.3
CD40-206ENST00000489304 PPBPP02775 128 aa13.2□□□□□ -0.3
CD40-206ENST00000489304 OR10D4PQ8NGN7 298 aa13.2□□□□□ -0.3
CD40-206ENST00000489304 PACRGQ96M98 296 aaPredicted RBP13.2□□□□□ -0.3
CD40-206ENST00000489304 PRELID3AQ96N28 172 aa13.2□□□□□ -0.3
CD40-206ENST00000489304 MCRIP2Q9BUT9 160 aaKnown RBP13.2□□□□□ -0.3
CD40-206ENST00000489304 MDFICQ9P1T7 246 aa13.2□□□□□ -0.3
CD40-206ENST00000489304 CKS2P33552 79 aa13.19□□□□□ -0.3
CD40-206ENST00000489304 NUTF2P61970 127 aaKnown RBP13.19□□□□□ -0.3
CD40-206ENST00000489304 CBY3A6NI87 242 aa13.19□□□□□ -0.3
CD40-206ENST00000489304 NIT1Q86X76 327 aa13.19□□□□□ -0.3
CD40-206ENST00000489304 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
CD40-206ENST00000489304 XCL2Q9UBD3 114 aa13.18□□□□□ -0.3
CD40-206ENST00000489304 NOTCH3Q9UM47 2321 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 LINC00518Q8N0U6 118 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 DEFB125Q8N687 156 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 AP1S3Q96PC3 154 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 MDFIQ99750 246 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 DPH3P1Q9H4G8 78 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 LAMTOR2Q9Y2Q5 125 aa13.17□□□□□ -0.3
CD40-206ENST00000489304 SMKR1H3BMG3 65 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 CHCHD1Q96BP2 118 aaKnown RBP13.16□□□□□ -0.3
CD40-206ENST00000489304 LINC01587Q99440 93 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 TRRAPQ9Y4A5 3859 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 WIPF1O43516 503 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 NCR2O95944 276 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 SMIM6P0DI80 62 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 RNASEKQ6P5S7 137 aaKnown RBP13.16□□□□□ -0.3
CD40-206ENST00000489304 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 SAMD10Q9BYL1 202 aa13.16□□□□□ -0.3
CD40-206ENST00000489304 NPYP01303 97 aa13.15□□□□□ -0.3
CD40-206ENST00000489304 GIG44P09565 113 aaPredicted RBP13.15□□□□□ -0.3
CD40-206ENST00000489304 LINC00614P0C842 121 aa13.15□□□□□ -0.3
CD40-206ENST00000489304 OXLD1Q5BKU9 147 aa13.15□□□□□ -0.3
CD40-206ENST00000489304 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
CD40-206ENST00000489304 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
CD40-206ENST00000489304 C1orf158Q8N1D5 194 aa13.15□□□□□ -0.3
CD40-206ENST00000489304 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
CD40-206ENST00000489304 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
CD40-206ENST00000489304 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
CD40-206ENST00000489304 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
CD40-206ENST00000489304 MRAP2Q96G30 205 aa13.14□□□□□ -0.31
CD40-206ENST00000489304 HSBP1O75506 76 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 GAS8-AS1O95177 125 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 HTN1P15515 57 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 PMCHP20382 165 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 AMTP48728 403 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 ZNF415Q09FC8 603 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 GSN-AS1Q9NRJ2 163 aa13.13□□□□□ -0.31
CD40-206ENST00000489304 STAB1Q9NY15 2570 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 TNFRSF6BO95407 300 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 PRM2P04554 102 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 LINC00315P59091 139 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 FAM19A2Q8N3H0 131 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 C11orf72Q8NBR9 251 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 PRSS3P2Q8NHM4 247 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 PTH2Q96A98 100 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 CMYA5Q8N3K9 4069 aa13.12□□□□□ -0.31
CD40-206ENST00000489304 GATA1P15976 413 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms