RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 B4DEV8 164 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 PAGE4O60829 102 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 SH2D1AO60880 128 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 ASIPP42127 132 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 CRIP1P50238 77 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 UBE2G1P62253 170 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 Q6ZSN1 163 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 HIST1H2BAQ96A08 127 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 NKX6-2Q9C056 277 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-206ENST00000489142 JPT2Q9H910 190 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
VTI1A-206ENST00000489142 TMSB15BA0A087X1C1 80 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 KANTRA0A1W2PQU2 76 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 GRIFINA4D1Z8 144 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 BCL2L11O43521 198 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 DNAH10OSP0CZ25 163 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 BTF3P20290 206 aaKnown RBP9.5□□□□□ -0.89
VTI1A-206ENST00000489142 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-206ENST00000489142 STOML3Q8TAV4 291 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 SFT2D1Q8WV19 159 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 FMC1Q96HJ9 113 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
VTI1A-206ENST00000489142 HMSDA8MTL9 139 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 KRBOX1C9JBD0 128 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 CRYGDP07320 174 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 EVI2AP22794 236 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 AKR1C3P42330 323 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 RHOHQ15669 191 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 SAMD10Q9BYL1 202 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 PARLQ9H300 379 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 MSRB1Q9NZV6 116 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 RYR1P21817 5038 aa9.49□□□□□ -0.89
VTI1A-206ENST00000489142 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 A0A0D9SG52 128 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 TRBV6-4A0A1B0GX49 114 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 SEC11BP0C7V7 166 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 FAM162BQ5T6X4 162 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 PTH2Q96A98 100 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 Q9UF83 564 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 ZFP30Q9Y2G7 519 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
VTI1A-206ENST00000489142 HSPG2P98160 4391 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 PFDN1O60925 122 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 LTAP01374 205 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 ARMS2P0C7Q2 107 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 SH2D6Q7Z4S9 175 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 IL36BQ9NZH7 164 aa9.47□□□□□ -0.89
VTI1A-206ENST00000489142 IGHV3-38A0A0C4DH36 116 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 GAGE12JA6NER3 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 A8MWV9 139 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 UMAD1C9J7I0 102 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 CDK2AP2O75956 126 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 MGST1P10620 155 aaKnown RBP9.46□□□□□ -0.9
VTI1A-206ENST00000489142 ERVFC1-1P60608 527 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 GAGE1Q13065 139 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 GAGE4Q13068 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 GAGE5Q13069 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 GAGE13Q4V321 117 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 C14orf178Q8N769 122 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-206ENST00000489142 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.9
VTI1A-206ENST00000489142 A0A087WWL8 130 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 TRAV8-6A0A0B4J262 113 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 TRBV6-1A0A0K0K1D8 114 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 CIDEAO60543 219 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 TIRAPP58753 221 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 ZNF674Q2M3X9 581 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 COX8CQ7Z4L0 72 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 Q8N3U1 123 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 ATP6V0E2Q8NHE4 81 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 TCEAL7Q9BRU2 100 aa9.45□□□□□ -0.9
VTI1A-206ENST00000489142 A0A087WTM6 91 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 M0R381 172 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 H2AFB1P0C5Y9 115 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
VTI1A-206ENST00000489142 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 Q9HAA7 133 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 PHLDA3Q9Y5J5 127 aa9.44□□□□□ -0.9
VTI1A-206ENST00000489142 DNAH5Q8TE73 4624 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 EREGO14944 169 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 LINC00694P0DN24 101 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 TPT1P13693 172 aaKnown RBP9.43□□□□□ -0.9
VTI1A-206ENST00000489142 CCL20P78556 96 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 DNLZQ5SXM8 178 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 LELP1Q5T871 98 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms