RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 MYMXA0A1B0GTQ4 84 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 RHODO00212 210 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 LENEPQ9Y5L5 61 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 C11orf71Q6IPW1 123 aa14.87□□□□□ -0.03
HMG20B-213ENST00000488973 TOMM6Q96B49 74 aa14.87□□□□□ -0.03
HMG20B-213ENST00000488973 TRBV7-1A0A0A6YYK4 115 aa14.87□□□□□ -0.03
HMG20B-213ENST00000488973 H3BVH4 76 aa14.87□□□□□ -0.03
HMG20B-213ENST00000488973 Q6ZQT7 251 aa14.86□□□□□ -0.03
HMG20B-213ENST00000488973 SIRPDQ9H106 197 aa14.86□□□□□ -0.03
HMG20B-213ENST00000488973 M0QXV9 152 aa14.86□□□□□ -0.03
HMG20B-213ENST00000488973 NDUFV3P56181 108 aaKnown RBP14.86□□□□□ -0.03
HMG20B-213ENST00000488973 NEXN-AS1Q8NBZ9 246 aa14.86□□□□□ -0.03
HMG20B-213ENST00000488973 SCGB3A1Q96QR1 104 aa14.86□□□□□ -0.03
HMG20B-213ENST00000488973 CCDC179H3BU77 68 aa14.85□□□□□ -0.03
HMG20B-213ENST00000488973 ZFP36P26651 326 aaKnown RBP14.85□□□□□ -0.03
HMG20B-213ENST00000488973 SUMO2P61956 95 aaKnown RBP14.85□□□□□ -0.03
HMG20B-213ENST00000488973 AMTNQ6UX39 209 aa14.85□□□□□ -0.03
HMG20B-213ENST00000488973 IGHV3-49A0A0A0MS15 119 aa14.85□□□□□ -0.03
HMG20B-213ENST00000488973 TMEM262E9PQX1 116 aa14.85□□□□□ -0.03
HMG20B-213ENST00000488973 NFE4Q86UQ8 179 aa14.85□□□□□ -0.03
HMG20B-213ENST00000488973 CFAP126Q5VTH2 177 aa14.84□□□□□ -0.03
HMG20B-213ENST00000488973 PTH2Q96A98 100 aa14.84□□□□□ -0.03
HMG20B-213ENST00000488973 PRR9Q5T870 116 aa14.84□□□□□ -0.03
HMG20B-213ENST00000488973 PPDPFLQ8WWR9 84 aa14.84□□□□□ -0.03
HMG20B-213ENST00000488973 C16orf92Q96LL3 132 aa14.84□□□□□ -0.03
HMG20B-213ENST00000488973 G3V318 75 aa14.83□□□□□ -0.04
HMG20B-213ENST00000488973 RASL10AQ92737 203 aa14.83□□□□□ -0.04
HMG20B-213ENST00000488973 AJUBAQ96IF1 538 aa14.83□□□□□ -0.04
HMG20B-213ENST00000488973 CITED2Q99967 270 aaPredicted RBP14.83□□□□□ -0.04
HMG20B-213ENST00000488973 WIPF1O43516 503 aa14.83□□□□□ -0.04
HMG20B-213ENST00000488973 UBE2E1P51965 193 aa14.83□□□□□ -0.04
HMG20B-213ENST00000488973 C9orf139Q6ZV77 190 aa14.83□□□□□ -0.04
HMG20B-213ENST00000488973 GLMPQ8WWB7 406 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 PPDPFQ9H3Y8 114 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 DPH3P1Q9H4G8 78 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 TLN1Q9Y490 2541 aaKnown RBP14.82□□□□□ -0.04
HMG20B-213ENST00000488973 CCL21O00585 134 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 HOXA3O43365 443 aaPredicted RBP14.82□□□□□ -0.04
HMG20B-213ENST00000488973 ITLN2Q8WWU7 325 aaPredicted RBP14.82□□□□□ -0.04
HMG20B-213ENST00000488973 NRGNQ92686 78 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 LINC00477Q96M19 166 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 KLK15Q9H2R5 256 aa14.82□□□□□ -0.04
HMG20B-213ENST00000488973 LGALS1P09382 135 aaKnown RBP14.81□□□□□ -0.04
HMG20B-213ENST00000488973 TMEM126AQ9H061 195 aa14.81□□□□□ -0.04
HMG20B-213ENST00000488973 M0R381 172 aa14.81□□□□□ -0.04
HMG20B-213ENST00000488973 LINC01548A6NM66 108 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 MORN3Q6PF18 240 aaPredicted RBP14.8□□□□□ -0.04
HMG20B-213ENST00000488973 BAALCQ8WXS3 180 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 PRORYQ9H606 182 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 IGF2RP11717 2491 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 TRAV21A0A0B4J279 112 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 SMCPP49901 116 aaPredicted RBP14.8□□□□□ -0.04
HMG20B-213ENST00000488973 Q6Q795 121 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 C2orf66Q6UXQ4 117 aa14.8□□□□□ -0.04
HMG20B-213ENST00000488973 GAGE2BQ13066 116 aa14.79□□□□□ -0.04
HMG20B-213ENST00000488973 GAGE2EQ4V326 116 aa14.79□□□□□ -0.04
HMG20B-213ENST00000488973 ZFAND2AQ8N6M9 145 aa14.79□□□□□ -0.04
HMG20B-213ENST00000488973 C20orf173Q96LM9 149 aa14.79□□□□□ -0.04
HMG20B-213ENST00000488973 GAGE2DQ9UEU5 116 aa14.79□□□□□ -0.04
HMG20B-213ENST00000488973 CSDC2Q9Y534 153 aaKnown RBP14.79□□□□□ -0.04
HMG20B-213ENST00000488973 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
HMG20B-213ENST00000488973 IFITM1P13164 125 aa14.78□□□□□ -0.04
HMG20B-213ENST00000488973 RPL39LQ96EH5 51 aaKnown RBP14.78□□□□□ -0.04
HMG20B-213ENST00000488973 PRADC1Q9BSG0 188 aa14.78□□□□□ -0.04
HMG20B-213ENST00000488973 HRNRQ86YZ3 2850 aaPredicted RBP14.78□□□□□ -0.04
HMG20B-213ENST00000488973 TRAV25A0A0B4J276 109 aa14.78□□□□□ -0.04
HMG20B-213ENST00000488973 IGF1P05019 195 aa14.78□□□□□ -0.04
HMG20B-213ENST00000488973 SAA4P35542 130 aa14.78□□□□□ -0.04
HMG20B-213ENST00000488973 RNF223E7ERA6 249 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 PPP1R17O96001 155 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 ZNF688P0C7X2 276 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 S100A4P26447 101 aaKnown RBP14.77□□□□□ -0.04
HMG20B-213ENST00000488973 ASIPP42127 132 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 ADORA2A-AS1P86434 159 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 TTC32Q5I0X7 151 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 PHLDA3Q9Y5J5 127 aa14.77□□□□□ -0.04
HMG20B-213ENST00000488973 OVOL1O14753 267 aa14.77□□□□□ -0.05
HMG20B-213ENST00000488973 CDSNQ15517 529 aa14.77□□□□□ -0.05
HMG20B-213ENST00000488973 TEN1Q86WV5 123 aa14.77□□□□□ -0.05
HMG20B-213ENST00000488973 C14orf178Q8N769 122 aaPredicted RBP14.77□□□□□ -0.05
HMG20B-213ENST00000488973 OR10J6PQ8NGY7 276 aa14.76□□□□□ -0.05
HMG20B-213ENST00000488973 CARD19Q96LW7 228 aa14.76□□□□□ -0.05
HMG20B-213ENST00000488973 ANXA2RQ3ZCQ2 193 aa14.76□□□□□ -0.05
HMG20B-213ENST00000488973 DLX4Q92988 240 aaPredicted RBP14.76□□□□□ -0.05
HMG20B-213ENST00000488973 ZNF815PA8K554 130 aa14.75□□□□□ -0.05
HMG20B-213ENST00000488973 COX6B1P14854 86 aa14.75□□□□□ -0.05
HMG20B-213ENST00000488973 C5orf56Q8N8D9 126 aa14.75□□□□□ -0.05
HMG20B-213ENST00000488973 FAM223BA6NKX1 122 aa14.75□□□□□ -0.05
HMG20B-213ENST00000488973 FAM223AQ8IWN6 122 aa14.75□□□□□ -0.05
HMG20B-213ENST00000488973 UBE2D1P51668 147 aa14.74□□□□□ -0.05
HMG20B-213ENST00000488973 CACNA1BQ00975 2339 aa14.74□□□□□ -0.05
HMG20B-213ENST00000488973 GPHB5Q86YW7 130 aa14.74□□□□□ -0.05
HMG20B-213ENST00000488973 MGPP08493 103 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 POM121L12Q8N7R1 296 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 SPTBN4Q9H254 2564 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 TRBV20-1A0A075B6N2 111 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 SOCS3O14543 225 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 SPRY2O43597 315 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 SCGB1D4Q6XE38 83 aa14.73□□□□□ -0.05
HMG20B-213ENST00000488973 FAM19A4Q96LR4 140 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms