RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SMUG1Q53HV7 270 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 CLLU1Q5K131 121 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 SAPCD1Q5SSQ6 148 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 TCEAL7Q9BRU2 100 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 KRTAP1-5Q9BYS1 174 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 VAX2Q9UIW0 290 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 KIAA1109Q2LD37 5005 aa9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 RBFOX3A6NFN3 312 aa9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 K7EQD1 137 aa9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 NXPH4O95158 308 aa9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 PFN1P07737 140 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 BCL2P10415 239 aa9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 PRNTQ86SH4 94 aa9.49□□□□□ -0.89
SPTLC1-207ENST00000488921 GYPEP15421 78 aa9.48□□□□□ -0.89
SPTLC1-207ENST00000488921 MEF2BQ02080 365 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-207ENST00000488921 ZNF575Q86XF7 245 aa9.48□□□□□ -0.89
SPTLC1-207ENST00000488921 HIST1H2BAQ96A08 127 aa9.48□□□□□ -0.89
SPTLC1-207ENST00000488921 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 PDE6DO43924 150 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 CIDEAO60543 219 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 PEA15Q15121 130 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 LYPD5Q6UWN5 251 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 SH2D6Q7Z4S9 175 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
SPTLC1-207ENST00000488921 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
SPTLC1-207ENST00000488921 K7EP13 123 aa9.46□□□□□ -0.9
SPTLC1-207ENST00000488921 PEX7O00628 323 aa9.46□□□□□ -0.9
SPTLC1-207ENST00000488921 LINC00315P59091 139 aa9.46□□□□□ -0.9
SPTLC1-207ENST00000488921 ZNF876PQ49A33 203 aa9.46□□□□□ -0.9
SPTLC1-207ENST00000488921 TOR2AQ5JU69 321 aa9.46□□□□□ -0.9
SPTLC1-207ENST00000488921 S100A9P06702 114 aaKnown RBP9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 UBE2G1P62253 170 aa9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 ZNF506Q5JVG8 444 aa9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 C11orf21Q9P2W6 132 aa9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 LY96Q9Y6Y9 160 aa9.45□□□□□ -0.9
SPTLC1-207ENST00000488921 AKR1C3P42330 323 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 Q86TA4 180 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 NFE4Q86UQ8 179 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 NHLRC2Q8NBF2 726 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 PTH2Q96A98 100 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
SPTLC1-207ENST00000488921 TRAV34A0A0B4J273 112 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 FABP5P3A8MUU1 101 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 RS1O15537 224 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 EVI2AP22794 236 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 S100A4P26447 101 aaKnown RBP9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 RHOHQ15669 191 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 FMC1Q96HJ9 113 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 LINC00479Q96M42 142 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 PRADC1Q9BSG0 188 aa9.43□□□□□ -0.9
SPTLC1-207ENST00000488921 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 TMEM250H0YL14 139 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 CEBPGP53567 150 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 TIRAPP58753 221 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 SPATA12Q7Z6I5 190 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 ZFP30Q9Y2G7 519 aa9.42□□□□□ -0.9
SPTLC1-207ENST00000488921 EREGO14944 169 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 MGST1P10620 155 aaKnown RBP9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 ASIPP42127 132 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 WFDC10BQ8IUB3 73 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 C10orf126Q8N4M7 172 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 LRP1BQ9NZR2 4599 aa9.41□□□□□ -0.9
SPTLC1-207ENST00000488921 IGKV3D-20A0A0C4DH25 116 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 A8MWV9 139 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 B4DEV8 164 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 CDK2AP2O75956 126 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 ERVFC1-1P60608 527 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 Q6ZRN7 208 aaPredicted RBP9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 IL36BQ9NZH7 164 aa9.4□□□□□ -0.9
SPTLC1-207ENST00000488921 TRBV6-1A0A0K0K1D8 114 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 LINC00862A6NCI5 91 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 SRP19P09132 144 aaKnown RBP9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 ZNF674Q2M3X9 581 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 ZFP2Q6ZN57 461 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 COMMD7Q86VX2 200 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
SPTLC1-207ENST00000488921 HSPG2P98160 4391 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms