RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 I3L2K1 104 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 MGPP08493 103 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 SIGLEC9Q9Y336 463 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 Q6ZSV7 163 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 DOPEY2Q9Y3R5 2298 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 A0A0J9YY99 117 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 C11orf86A6NJI1 115 aa12.43□□□□□ -0.42
MCF2L-229ENST00000488765 ZNF22P17026 224 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-229ENST00000488765 IGHV1-46P01743 117 aa12.42□□□□□ -0.42
MCF2L-229ENST00000488765 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
MCF2L-229ENST00000488765 LYRM7Q5U5X0 104 aa12.42□□□□□ -0.42
MCF2L-229ENST00000488765 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
MCF2L-229ENST00000488765 TEX22C9J3V5 150 aa12.42□□□□□ -0.42
MCF2L-229ENST00000488765 RAB1BQ9H0U4 201 aa12.42□□□□□ -0.42
MCF2L-229ENST00000488765 DUSP14O95147 198 aaKnown RBP12.41□□□□□ -0.42
MCF2L-229ENST00000488765 PSMG4Q5JS54 123 aa12.41□□□□□ -0.42
MCF2L-229ENST00000488765 ASCL5Q7RTU5 278 aa12.41□□□□□ -0.42
MCF2L-229ENST00000488765 K7EIM0 57 aa12.41□□□□□ -0.42
MCF2L-229ENST00000488765 HERVK_113P61574 105 aa12.41□□□□□ -0.42
MCF2L-229ENST00000488765 Q6ZS92 163 aa12.41□□□□□ -0.42
MCF2L-229ENST00000488765 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
MCF2L-229ENST00000488765 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-229ENST00000488765 PRSS2P07478 247 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 ADIPOQQ15848 244 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 SLC25A15Q9Y619 301 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 RS1O15537 224 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
MCF2L-229ENST00000488765 OR10J6PQ8NGY7 276 aa12.4□□□□□ -0.42
MCF2L-229ENST00000488765 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.43
MCF2L-229ENST00000488765 INS-IGF2F8WCM5 200 aa12.39□□□□□ -0.43
MCF2L-229ENST00000488765 IGHV3-30P01768 117 aa12.39□□□□□ -0.43
MCF2L-229ENST00000488765 IGHV3-30-5P0DP03 117 aa12.39□□□□□ -0.43
MCF2L-229ENST00000488765 DEFB1P60022 68 aa12.39□□□□□ -0.43
MCF2L-229ENST00000488765 EEF1AKMT3Q96AZ1 226 aa12.39□□□□□ -0.43
MCF2L-229ENST00000488765 CELSR1Q9NYQ6 3014 aa12.39□□□□□ -0.43
MCF2L-229ENST00000488765 IGF1P05019 195 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 ASIPP42127 132 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-229ENST00000488765 SPXQ9BT56 116 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 ACACBO00763 2458 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 IGHG4P01861 327 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 C2orf82Q6UX34 121 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 SMIM2Q9BVW6 85 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 EDA2RQ9HAV5 297 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 ZNF580Q9UK33 172 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
MCF2L-229ENST00000488765 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 CREBBPQ92793 2442 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 HIVEP3Q5T1R4 2406 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 TIMM23O14925 209 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 COX6B1P14854 86 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 DLX6P56179 175 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 LINC01620Q4KN68 170 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 SBSPONQ8IVN8 264 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 LINC01587Q99440 93 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 CEACAM4O75871 244 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 C9orf153Q5TBE3 101 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 NOTCH3Q9UM47 2321 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 SMAD5-AS1Q9Y6J3 95 aa12.37□□□□□ -0.43
MCF2L-229ENST00000488765 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
MCF2L-229ENST00000488765 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
MCF2L-229ENST00000488765 MUSTN1Q8IVN3 82 aa12.36□□□□□ -0.43
MCF2L-229ENST00000488765 H3BMM0 161 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 LYNX1G3V0Z9 82 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 LYNX1P0DP58 116 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 PMVKQ15126 192 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
MCF2L-229ENST00000488765 HES1Q14469 280 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 TIMD4Q96H15 378 aa12.35□□□□□ -0.43
MCF2L-229ENST00000488765 SORL1Q92673 2214 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 IGHV3-33P01772 117 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 IGLV1-44P01699 117 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 CRYGDP07320 174 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 Q9UFV3 132 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
MCF2L-229ENST00000488765 LINC01546A6NGU7 62 aa12.33□□□□□ -0.44
MCF2L-229ENST00000488765 FAM19A5Q7Z5A7 132 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-229ENST00000488765 MBD3L4A6NDZ8 208 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-229ENST00000488765 MBD3L3A6NE82 208 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-229ENST00000488765 MBD3L5A6NJ08 208 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-229ENST00000488765 BSPH1Q075Z2 132 aa12.33□□□□□ -0.44
MCF2L-229ENST00000488765 MBD3L2Q8NHZ7 208 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-229ENST00000488765 AGPAT4-IT1Q9H0P7 198 aa12.33□□□□□ -0.44
MCF2L-229ENST00000488765 NDUFB3O43676 98 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 S100A4P26447 101 aaKnown RBP12.32□□□□□ -0.44
MCF2L-229ENST00000488765 TOMM6Q96B49 74 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 3402.6 ms