RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 A0A087WWL8 130 aa9.55□□□□□ -0.88
CLIC4-202ENST00000488683 IGHV4-59P01825 116 aa9.55□□□□□ -0.88
CLIC4-202ENST00000488683 ATP6V0BQ99437 205 aa9.55□□□□□ -0.88
CLIC4-202ENST00000488683 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
CLIC4-202ENST00000488683 OR10J6PQ8NGY7 276 aa9.55□□□□□ -0.88
CLIC4-202ENST00000488683 RASL10AQ92737 203 aa9.55□□□□□ -0.88
CLIC4-202ENST00000488683 GAGE12BA1L429 117 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 PRM2P04554 102 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 LAGE3Q14657 143 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 SMIM15Q7Z3B0 74 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 PHLDA3Q9Y5J5 127 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 ZNF688P0C7X2 276 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 SEC11AP67812 179 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 CLEC2AQ6UVW9 174 aa9.54□□□□□ -0.88
CLIC4-202ENST00000488683 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 OR9G4Q8NGQ1 327 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
CLIC4-202ENST00000488683 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 MSMBP08118 114 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 RNASE3P12724 160 aaKnown RBP9.53□□□□□ -0.88
CLIC4-202ENST00000488683 MTURNQ8N3F0 131 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 MYOZ3Q8TDC0 251 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 LENEPQ9Y5L5 61 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
CLIC4-202ENST00000488683 NACAE9PAV3 2078 aa9.52□□□□□ -0.88
CLIC4-202ENST00000488683 CCDC168Q8NDH2 2452 aa9.52□□□□□ -0.88
CLIC4-202ENST00000488683 IGLV1-40P01703 118 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 CDKN1BP46527 198 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 HSD52Q0P140 79 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 CHAC1Q9BUX1 264 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 TRAV21A0A0B4J279 112 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 OVOL1O14753 267 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 DPM2O94777 84 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 HTN1P15515 57 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 AP1S3Q96PC3 154 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 VPS25Q9BRG1 176 aa9.52□□□□□ -0.89
CLIC4-202ENST00000488683 NHP2Q9NX24 153 aaKnown RBP9.52□□□□□ -0.89
CLIC4-202ENST00000488683 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
CLIC4-202ENST00000488683 SIVA1O15304 175 aa9.51□□□□□ -0.89
CLIC4-202ENST00000488683 DEFB112Q30KQ8 113 aa9.51□□□□□ -0.89
CLIC4-202ENST00000488683 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
CLIC4-202ENST00000488683 ASIPP42127 132 aa9.51□□□□□ -0.89
CLIC4-202ENST00000488683 CFHR3Q02985 330 aa9.51□□□□□ -0.89
CLIC4-202ENST00000488683 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 H3BUA1 57 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 NDUFS8O00217 210 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
CLIC4-202ENST00000488683 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 BRI3O95415 125 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 SUMO2P61956 95 aaKnown RBP9.5□□□□□ -0.89
CLIC4-202ENST00000488683 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 SFTA2Q6UW10 78 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 MRAP2Q96G30 205 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
CLIC4-202ENST00000488683 ATP5LO75964 103 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 SRSF1Q07955 248 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLIC4-202ENST00000488683 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 C18orf65Q6ZTR6 163 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 DAZ1Q9NQZ3 744 aaKnown RBP9.49□□□□□ -0.89
CLIC4-202ENST00000488683 PRRC2AP48634 2157 aaKnown RBP9.49□□□□□ -0.89
CLIC4-202ENST00000488683 A6NDN8 102 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 F5H697 171 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 H3BRM9 83 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 DUSP14O95147 198 aaKnown RBP9.49□□□□□ -0.89
CLIC4-202ENST00000488683 CD7P09564 240 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 CSTL1Q9H114 145 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
CLIC4-202ENST00000488683 RIPPLY3P57055 190 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 APRG1Q8IVJ8 170 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 APCP25054 2843 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.48□□□□□ -0.89
CLIC4-202ENST00000488683 SYNJ2BPP57105 145 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 OPRPNQ99935 248 aaPredicted RBP9.48□□□□□ -0.89
CLIC4-202ENST00000488683 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
CLIC4-202ENST00000488683 A0A087WX48 190 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 SPCS1Q9Y6A9 102 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 DCANP1Q8TF63 244 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 TGFAP01135 160 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 UFSP1Q6NVU6 142 aa9.47□□□□□ -0.89
CLIC4-202ENST00000488683 CHTOPQ9Y3Y2 248 aaKnown RBP9.47□□□□□ -0.89
CLIC4-202ENST00000488683 A0A1W2PPM0 123 aa9.46□□□□□ -0.89
CLIC4-202ENST00000488683 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.89
CLIC4-202ENST00000488683 AMTNQ6UX39 209 aa9.46□□□□□ -0.89
CLIC4-202ENST00000488683 BAALCQ8WXS3 180 aa9.46□□□□□ -0.89
CLIC4-202ENST00000488683 BEX4Q9NWD9 120 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms