RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TRANK1O15050 2925 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 TRAV17A0A0B4J275 112 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 A0A0J9YX75 114 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 C11orf86A6NJI1 115 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 I3L2K1 104 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 OVOL1O14753 267 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 MAGEA5P43359 124 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 MFAP4P55083 255 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 UCNP55089 124 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 IL11RAQ14626 422 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 ZNF56Q15929 161 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 ZNF474Q6S9Z5 364 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 LINC00643Q86TS7 51 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 LINC00311Q8N616 119 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 METTL26Q96S19 204 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 SLC50A1Q9BRV3 221 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 AGPAT4-IT1Q9H0P7 198 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 KLK15Q9H2R5 256 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 CTSZQ9UBR2 303 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 RAI1Q7Z5J4 1906 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV1-69DA0A0B4J2H0 117 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 H7C423 109 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 EMP1P54849 157 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 Q0VFX4 171 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 C2orf82Q6UX34 121 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 C5orf38Q86SI9 138 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 EDA2RQ9HAV5 297 aa3.59□□□□□ -1.83
CDC42BPA-213ENST00000488131 DSCAMO60469 2012 aa3.59□□□□□ -1.84
CDC42BPA-213ENST00000488131 PRR14LQ5THK1 2151 aa3.59□□□□□ -1.84
CDC42BPA-213ENST00000488131 DOCK7Q96N67 2140 aa3.59□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGKV2-40A0A087WW87 121 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 TEX22C9J3V5 150 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 F8WDY8 70 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 M0R381 172 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGKV2D-40P01614 121 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGLV1-44P01699 117 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 TRGV3P03979 118 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 CCL5P13501 91 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV1-2P23083 117 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 RPL27AP46776 148 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 HCP5Q6MZN7 132 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 GUSBP11Q6P575 273 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 CEMP1Q6PRD7 247 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 ZNF491Q8N8L2 437 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 KLHL30-AS1Q8NEE0 82 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 DOCK10Q96BY6 2186 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 GAFA1Q96PS6 74 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 ZNRD1Q9P1U0 126 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 KLK5Q9Y337 293 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 VCANP13611 3396 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV7-4-1A0A0J9YVY3 117 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 TMEM223A0PJW6 202 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 K7ENP7 123 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 ATOX1O00244 68 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 LST1O00453 97 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 Q5XG85 94 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 Q6ZS52 159 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 FAM216BQ8N7L0 139 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 DUX5Q96PT3 197 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 TTTY12Q9BZ98 90 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 LINC00527Q9UJ94 153 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 U3KQA8 63 aa3.58□□□□□ -1.84
CDC42BPA-213ENST00000488131 SVILO95425 2214 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 INTS1Q8N201 2190 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 SDHAF1A6NFY7 115 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 J3QQQ9 107 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 ORM1P02763 201 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 DLX6P56179 175 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 DUX4L9Q6RFH8 374 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 Q6ZT83 130 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 Q8TAT8 98 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 DPH3Q96FX2 82 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 DUX3Q96PT4 197 aa3.57□□□□□ -1.84
CDC42BPA-213ENST00000488131 TRAV26-2A0A0B4J265 109 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGKV3D-20A0A0C4DH25 116 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGIPA6NJ69 53 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 K7EIM0 57 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 LEPROTO15243 131 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 OXTP01178 125 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 TSHBP01222 138 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV4-39P01824 125 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 ZNF22P17026 224 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 CNTFRP26992 372 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 DEFB119Q8N690 84 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 C14orf178Q8N769 122 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 SMCR5Q8TEV8 140 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 TMEM141Q96I45 108 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 TIMM17AQ99595 171 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 BEX4Q9NWD9 120 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 PEMTQ9UBM1 199 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 ICOSQ9Y6W8 199 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV3-21A0A0B4J1V1 117 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 CDX4O14627 284 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms