RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 APOC2P02655 101 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 GYPBP06028 91 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 RBP2P50120 134 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 C12orf73Q69YU5 71 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 LINC00322Q6ZN03 302 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 GTF2H5Q6ZYL4 71 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 C15orf53Q8NAA6 179 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 DMAC1Q96GE9 116 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 ODF3Q96PU9 254 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 ATG5Q9H1Y0 275 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 IER3IP1Q9Y5U9 82 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 ERBINQ96RT1 1412 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 COL24A1Q17RW2 1714 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 MYO5AQ9Y4I1 1855 aaKnown RBP1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 WDR97A6NE52 1622 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 COL4A5P29400 1685 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 USP54Q70EL1 1684 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 TECTAO75443 2155 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 NALCNQ8IZF0 1738 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 ADGRB1O14514 1584 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 LOC110117498A0A087WWA1 95 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 SPAARA0A1B0GVQ0 90 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 MCRIP1C9JLW8 97 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 HCRTO43612 131 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 KLF7O75840 302 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 IGKCP01834 107 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 IQCJQ1A5X6 159 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 SPATA45Q537H7 98 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 Q6AWC8 147 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 MRPL54Q6P161 138 aaKnown RBP1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 LYPD5Q6UWN5 251 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 C14orf144Q96I85 54 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 WFDC10AQ9H1F0 79 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 MRPL36Q9P0J6 103 aaKnown RBP1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 NDUFA12Q9UI09 145 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 POLEQ07864 2286 aa1.1□□□□□ -2.23
HMGB1P36-201ENST00000487709 DAPK1P53355 1430 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 TRAV23DV6A0A075B6W5 121 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 TRBV6-7A0A0A0MS04 114 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 TRBV10-1A0A0K0K1A3 114 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 IGHV3-30P01768 117 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 S100A8P05109 93 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 IGHV3-30-5P0DP03 117 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 PRB4P10163 310 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 SLC25A6P12236 298 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 GDF5OSQ5U4N7 250 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 CSAG1Q6PB30 78 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 NDUFA11Q86Y39 141 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 SVBPQ8N300 66 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 TMEM141Q96I45 108 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 LIMD2Q9BT23 127 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 RPRMQ9NS64 109 aa1.09□□□□□ -2.23
HMGB1P36-201ENST00000487709 A2ML1A8K2U0 1454 aa1.09□□□□□ -2.24
HMGB1P36-201ENST00000487709 MYOM2P54296 1465 aa1.09□□□□□ -2.24
HMGB1P36-201ENST00000487709 MRC2Q9UBG0 1479 aa1.09□□□□□ -2.24
HMGB1P36-201ENST00000487709 CCNB3Q8WWL7 1395 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 SCN8AQ9UQD0 1980 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 TMEM218A2RU14 115 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 NUPR2A6NF83 97 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 PDE6GP18545 87 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 CBLN1P23435 193 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 NPC2P61916 151 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 CATR1Q13166 79 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 C9orf153Q5TBE3 101 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 SLC48A1Q6P1K1 146 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 C8orf59Q8N0T1 100 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 LINC00526Q96FQ7 95 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 COA4Q9NYJ1 87 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 EML6Q6ZMW3 1958 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 LAMB2P55268 1798 aa1.08□□□□□ -2.24
HMGB1P36-201ENST00000487709 CXorf51AA0A1B0GTR3 108 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 TCRBV3S1A0A5B6 114 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 HIGD1CA8MV81 97 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 IFNA17P01571 189 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 IGLV3-1P01715 115 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 CCKP06307 115 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 IFITM1P13164 125 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 SPRNQ5BIV9 151 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 C9orf116Q5BN46 136 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 Q6ZS92 163 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 ACBD7Q8N6N7 88 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 TSKUQ8WUA8 353 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 LSM10Q969L4 123 aaKnown RBP1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 MRPL35Q9NZE8 188 aaKnown RBP1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 C22orf24Q9Y442 160 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 ADGRB2O60241 1585 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 SMARCA2P51531 1590 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 MYLKQ15746 1914 aa1.07□□□□□ -2.24
HMGB1P36-201ENST00000487709 PHLPP1O60346 1717 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 MICAL3Q7RTP6 2002 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 MAPKBP1O60336 1514 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 TRAV30A0A087WSZ9 112 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 FAM24AA6NFZ4 105 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 RPL37AP61513 92 aaKnown RBP1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 UBE2G1P62253 170 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 HSD52Q0P140 79 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 S100A7L2Q5SY68 101 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 C4orf33Q8N1A6 199 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 KIDINS220Q9ULH0 1771 aa1.06□□□□□ -2.24
HMGB1P36-201ENST00000487709 PZPP20742 1482 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms