RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 ZNF493Q6ZR52 646 aa5.86□□□□□ -1.47
ZNF541-204ENST00000487275 C1orf158Q8N1D5 194 aa5.86□□□□□ -1.47
ZNF541-204ENST00000487275 SYT8Q8NBV8 401 aa5.86□□□□□ -1.47
ZNF541-204ENST00000487275 C9orf85Q96MD7 179 aa5.86□□□□□ -1.47
ZNF541-204ENST00000487275 SCRT2Q9NQ03 307 aa5.86□□□□□ -1.47
ZNF541-204ENST00000487275 MDFICQ9P1T7 246 aa5.86□□□□□ -1.47
ZNF541-204ENST00000487275 SPRY2O43597 315 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BKO60814 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BJP06899 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 GIG44P09565 113 aaPredicted RBP5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BOP23527 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BBP33778 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 APOC4P55056 127 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 NDUFA6P56556 154 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 EGFEM1PQ0D2K5 195 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 SLAQ13239 276 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 TMEM191AQ9H0A3 160 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 MSRB1Q9NZV6 116 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 NOTCH3Q9UM47 2321 aa5.85□□□□□ -1.47
ZNF541-204ENST00000487275 KIR2DL5BA0A0G2JN68 375 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 KIR2DL5BA0A0G2JPC4 375 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 G3V4G9 280 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 NXPH4O95158 308 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 IGHV4-30-4P0DP06 118 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 SRIP30626 198 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 KRTAP10-11P60412 298 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 DMRTA1Q5VZB9 504 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 FAM104BQ5XKR9 115 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 AMN1Q8IY45 258 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 KIR2DL5AQ8N109 375 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 KIR2DL5BQ8NHK3 375 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 AP1S3Q96PC3 154 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 RCHY1Q96PM5 261 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 GSN-AS1Q9NRJ2 163 aa5.84□□□□□ -1.47
ZNF541-204ENST00000487275 LOC105371267A0A1B0GV96 52 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 PRM2P04554 102 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 SMIM17P0DL12 118 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 EVI2AP22794 236 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 RIPPLY3P57055 190 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 RRN3P1Q2M238 152 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 MRPL51Q4U2R6 128 aaKnown RBP5.83□□□□□ -1.48
ZNF541-204ENST00000487275 SAMD5Q5TGI4 173 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 CSNK1G2-AS1Q8NCQ2 148 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 TMEM263Q8WUH6 116 aaKnown RBP5.83□□□□□ -1.48
ZNF541-204ENST00000487275 SPXQ9BT56 116 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 TENM1Q9UKZ4 2725 aa5.83□□□□□ -1.48
ZNF541-204ENST00000487275 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
ZNF541-204ENST00000487275 M0R2P5 195 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 UBE2CO00762 179 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 MGPP08493 103 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 AZU1P20160 251 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 RAB4AP20338 218 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 SNRPEP62304 92 aaKnown RBP5.82□□□□□ -1.48
ZNF541-204ENST00000487275 ZNF876PQ49A33 203 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 ZNF705AQ6ZN79 300 aaPredicted RBP5.82□□□□□ -1.48
ZNF541-204ENST00000487275 BAGE3Q86Y29 109 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
ZNF541-204ENST00000487275 C11orf72Q8NBR9 251 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 RNASE8Q8TDE3 154 aaKnown RBP5.82□□□□□ -1.48
ZNF541-204ENST00000487275 RNF185Q96GF1 192 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 C16orf74Q96GX8 76 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 ALKBH7Q9BT30 221 aaPredicted RBP5.82□□□□□ -1.48
ZNF541-204ENST00000487275 DPH3P1Q9H4G8 78 aa5.82□□□□□ -1.48
ZNF541-204ENST00000487275 D6R8Y8 96 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 PPBPP02775 128 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 CKS2P33552 79 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 Q0VG73 95 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 OR10J3Q5JRS4 329 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 PIK3CD-AS1Q5SR53 167 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 ORMDL3Q8N138 153 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 PTH2Q96A98 100 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 JPT2Q9H910 190 aa5.81□□□□□ -1.48
ZNF541-204ENST00000487275 A0A087WWL8 130 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 TRGV1A0A0A0MS02 117 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 SMIM9A6NGZ8 99 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 A8MWV9 139 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 A8MZ25 164 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 SMKR1H3BMG3 65 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 NCR2O95944 276 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 IQCJQ1A5X6 159 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 DEFB135Q30KP9 77 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 COA6Q5JTJ3 125 aaKnown RBP5.8□□□□□ -1.48
ZNF541-204ENST00000487275 FAM74A4Q5TZK3 123 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 C18orf32Q8TCD1 76 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 MRAP2Q96G30 205 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 MRPL16Q9NX20 251 aaKnown RBP5.8□□□□□ -1.48
ZNF541-204ENST00000487275 U3KQK5 164 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 TRRAPQ9Y4A5 3859 aa5.8□□□□□ -1.48
ZNF541-204ENST00000487275 COL6A5A8TX70 2615 aa5.79□□□□□ -1.48
ZNF541-204ENST00000487275 STAB1Q9NY15 2570 aa5.79□□□□□ -1.48
ZNF541-204ENST00000487275 C5orf52A6NGY3 159 aa5.79□□□□□ -1.48
ZNF541-204ENST00000487275 F5H697 171 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms