RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 S100A2P29034 98 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 FXYD7P58549 80 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 SSTP61278 116 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 KIAA1644Q3SXP7 199 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 DMRTA1Q5VZB9 504 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 FAM104BQ5XKR9 115 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 PRIMA1Q86XR5 153 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 TMEM256Q8N2U0 113 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 OR10AG1Q8NH19 301 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 ALKBH7Q9BT30 221 aaPredicted RBP4.53□□□□□ -1.68
VAMP3-203ENST00000487194 C1QTNF4Q9BXJ3 329 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 C19orf73Q9NVV2 129 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 AGRNO00468 2067 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 COL6A5A8TX70 2615 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 IGHV3-16A0A0C4DH30 117 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 M0R381 172 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 WIPF1O43516 503 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 NXPH4O95158 308 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 PPBPP02775 128 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 ESDP10768 282 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
VAMP3-203ENST00000487194 ORMDL3Q8N138 153 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 Q8N1Y9 231 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 HIST3H2BBQ8N257 126 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 SYT8Q8NBV8 401 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 C18orf32Q8TCD1 76 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 TMEM18Q96B42 140 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 AP1S3Q96PC3 154 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 LINC01587Q99440 93 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 MSRB1Q9NZV6 116 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 XCL2Q9UBD3 114 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 ZMAT5Q9UDW3 170 aaKnown RBP4.52□□□□□ -1.69
VAMP3-203ENST00000487194 LAMTOR2Q9Y2Q5 125 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 TIMM8BQ9Y5J9 83 aaPredicted RBP4.52□□□□□ -1.69
VAMP3-203ENST00000487194 U3KQK5 164 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
VAMP3-203ENST00000487194 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 D6R8Y8 96 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 RBMY1A1P0DJD3 496 aaKnown RBP4.51□□□□□ -1.69
VAMP3-203ENST00000487194 RBMY1CP0DJD4 496 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 SMIM17P0DL12 118 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 RAB4AP20338 218 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 CKS2P33552 79 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 AKR1D1P51857 326 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 ZNF415Q09FC8 603 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
VAMP3-203ENST00000487194 MRPL51Q4U2R6 128 aaKnown RBP4.51□□□□□ -1.69
VAMP3-203ENST00000487194 PIK3CD-AS1Q5SR53 167 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 AMN1Q8IY45 258 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 PRELID3AQ96N28 172 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 SPXQ9BT56 116 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 TMEM208Q9BTX3 173 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 DPH3P1Q9H4G8 78 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 TP53TG3Q9ULZ0 132 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 GOLT1BQ9Y3E0 138 aa4.51□□□□□ -1.69
VAMP3-203ENST00000487194 SERF1AO75920 110 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 PPP1R17O96001 155 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 IGLL1P15814 213 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 EVI2AP22794 236 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 PDZD11Q5EBL8 140 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 PRR31Q5SQ13 230 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 DEFB125Q8N687 156 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 PTH2Q96A98 100 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 CHCHD1Q96BP2 118 aaKnown RBP4.5□□□□□ -1.69
VAMP3-203ENST00000487194 MRAP2Q96G30 205 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 RNF185Q96GF1 192 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
VAMP3-203ENST00000487194 HIST1H2BLQ99880 126 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 NDUFAF3Q9BU61 184 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 GSN-AS1Q9NRJ2 163 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
VAMP3-203ENST00000487194 KIR2DL5BA0A0G2JN68 375 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 KIR2DL5BA0A0G2JPC4 375 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 M0R2P5 195 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 HSBP1O75506 76 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 LINC00614P0C842 121 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 FABP4P15090 132 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 HTN1P15515 57 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 RPL35AP18077 110 aaKnown RBP4.49□□□□□ -1.69
VAMP3-203ENST00000487194 PMCHP20382 165 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 IQCJQ1A5X6 159 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 ZNF876PQ49A33 203 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 NIT1Q86X76 327 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 KIR2DL5AQ8N109 375 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 C1orf158Q8N1D5 194 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 KIR2DL5BQ8NHK3 375 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 PRSS3P2Q8NHM4 247 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 RCHY1Q96PM5 261 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 SAMD10Q9BYL1 202 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 CSTL1Q9H114 145 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 WFDC10AQ9H1F0 79 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 MAP1LC3AQ9H492 121 aa4.49□□□□□ -1.69
VAMP3-203ENST00000487194 IGHV3OR16-12A0A075B7B8 117 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 IFITM10A6NMD0 228 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 A8MWV9 139 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 MGPP08493 103 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 GIG44P09565 113 aaPredicted RBP4.48□□□□□ -1.69
VAMP3-203ENST00000487194 APOC4P55056 127 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms