RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 HOXA5P20719 270 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 RAB14P61106 215 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 RNF212Q495C1 297 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
LIMS3-205ENST00000487150 SMDT1Q9H4I9 107 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 RHODO00212 210 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 PAX4O43316 350 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 P01737 135 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 CCL18P55774 89 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 ZFP82Q8N141 532 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 PARLQ9H300 379 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 ICOSQ9Y6W8 199 aa10.26□□□□□ -0.77
LIMS3-205ENST00000487150 DYNC2H1Q8NCM8 4307 aaKnown RBP10.25□□□□□ -0.77
LIMS3-205ENST00000487150 ARMS2P0C7Q2 107 aa10.25□□□□□ -0.77
LIMS3-205ENST00000487150 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
LIMS3-205ENST00000487150 LY96Q9Y6Y9 160 aa10.25□□□□□ -0.77
LIMS3-205ENST00000487150 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 A0A0J9YY99 117 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 RAB19A4D1S5 217 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 FHL2Q14192 279 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 PEA15Q15121 130 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
LIMS3-205ENST00000487150 ALMS1Q8TCU4 4167 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 RS1O15537 224 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 SFTA3P0C7M3 94 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 CEBPGP53567 150 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 CRYBA4P53673 196 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 RHOHQ15669 191 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 MRPL23Q16540 153 aaKnown RBP10.23□□□□□ -0.77
LIMS3-205ENST00000487150 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 OR2D3Q8NGH3 330 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
LIMS3-205ENST00000487150 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
LIMS3-205ENST00000487150 PGPEP1LA6NFU8 196 aa10.22□□□□□ -0.77
LIMS3-205ENST00000487150 TRBV6-4A0A1B0GX49 114 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 A0A1W2PPQ1 181 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 ZNF727A8MUV8 499 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 M0R381 172 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 SNAI2O43623 268 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 GATA1P15976 413 aaPredicted RBP10.21□□□□□ -0.77
LIMS3-205ENST00000487150 SRIP30626 198 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.77
LIMS3-205ENST00000487150 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 VSIG2Q96IQ7 327 aa10.21□□□□□ -0.77
LIMS3-205ENST00000487150 PLECQ15149 4684 aaKnown RBP10.21□□□□□ -0.78
LIMS3-205ENST00000487150 F2Z2F3 143 aa10.2□□□□□ -0.78
LIMS3-205ENST00000487150 NXPH4O95158 308 aa10.2□□□□□ -0.78
LIMS3-205ENST00000487150 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
LIMS3-205ENST00000487150 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
LIMS3-205ENST00000487150 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
LIMS3-205ENST00000487150 RPP21Q9H633 154 aaKnown RBP10.2□□□□□ -0.78
LIMS3-205ENST00000487150 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
LIMS3-205ENST00000487150 A0A096LPF7 62 aa10.19□□□□□ -0.78
LIMS3-205ENST00000487150 SRP19P09132 144 aaKnown RBP10.19□□□□□ -0.78
LIMS3-205ENST00000487150 CACNG7P62955 275 aa10.19□□□□□ -0.78
LIMS3-205ENST00000487150 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
LIMS3-205ENST00000487150 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
LIMS3-205ENST00000487150 GYPEP15421 78 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 CT83Q5H943 113 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 OCC1Q8TAD7 63 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 SFRP2Q96HF1 295 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 UPK3BQ9BT76 320 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 MUC4Q99102 2169 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 DNAH1Q9P2D7 4330 aa10.18□□□□□ -0.78
LIMS3-205ENST00000487150 K7EN84 100 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 K7EQD1 137 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 SMIM17P0DL12 118 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 TTC32Q5I0X7 151 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 OR10AG1Q8NH19 301 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
LIMS3-205ENST00000487150 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
LIMS3-205ENST00000487150 LYSTQ99698 3801 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 A8MWL6 223 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 IGLC6P0CF74 106 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 ERVFC1-1P60608 527 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 TMEM241Q24JQ0 296 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 CLLU1Q5K131 121 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 C15orf54Q8N8G6 183 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 SLC25A29Q8N8R3 303 aa10.16□□□□□ -0.78
LIMS3-205ENST00000487150 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
LIMS3-205ENST00000487150 TRGC1P0CF51 173 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms