RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TAL2Q16559 108 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 FAM74A1Q5RGS3 127 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 AKR1C8PQ5T2L2 129 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 DPPA3Q6W0C5 159 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 LINC01551Q86U37 167 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 C15orf56Q8N910 161 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 ZNF418Q8TF45 676 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-216ENST00000487043 MBD3L1Q8WWY6 194 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 ACY3Q96HD9 319 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 CAMK2N2Q96S95 79 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 TRGV9Q99603 122 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 MGST2Q99735 147 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 GGTLC1Q9BX51 225 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 VSIRQ9H7M9 311 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 KCNIP2Q9NS61 270 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 RPRMQ9NS64 109 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 ZNF355PQ9NSJ1 428 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 SLC39A9Q9NUM3 307 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 C21orf62Q9NYP8 219 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 LINC00527Q9UJ94 153 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 TSSC4Q9Y5U2 329 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-216ENST00000487043 SVEP1Q4LDE5 3571 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 HIVEP2P31629 2446 aa2.59□□□□□ -2
PTCD3-216ENST00000487043 SONP18583 2426 aaKnown RBP2.58□□□□□ -2
PTCD3-216ENST00000487043 TRBV7-1A0A0A6YYK4 115 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 TRAV1-1A0A0B4J248 108 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 A0A1B0GW15 77 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 FAM223BA6NKX1 122 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 GNG7O60262 68 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 GGCTO75223 188 aaKnown RBP2.58□□□□□ -2
PTCD3-216ENST00000487043 YIF1AO95070 293 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 IGKV1-17P01599 117 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 TRGV3P03979 118 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 CTSGP08311 255 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 IGLC1P0CG04 106 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 RD3LP0DJH9 198 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 PSMB8P28062 276 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 ZNF90Q03938 601 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 ATP5G2Q06055 141 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 ZNF616Q08AN1 781 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 ACOT6Q3I5F7 207 aaPredicted RBP2.58□□□□□ -2
PTCD3-216ENST00000487043 MPV17L2Q567V2 206 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 Q56UQ5 140 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 MIC13Q5XKP0 118 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 PATE2Q6UY27 113 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 CYP2G1PQ6ZSU1 146 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 FAM223AQ8IWN6 122 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 RPP25LQ8N5L8 163 aaKnown RBP2.58□□□□□ -2
PTCD3-216ENST00000487043 CYB561D1Q8N8Q1 229 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 FAM213BQ8TBF2 198 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 Q8WTZ3 238 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 USMG5Q96IX5 58 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 C2orf88Q9BSF0 95 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 PBDC1Q9BVG4 233 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 C16orf95Q9H693 158 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 KLF12Q9Y4X4 402 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 PXMP4Q9Y6I8 212 aa2.58□□□□□ -2
PTCD3-216ENST00000487043 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 ANK3Q12955 4377 aaKnown RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 IGLV4-69A0A075B6H9 119 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 CTXND1A0A1B0GTU2 59 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 OR2T8A6NH00 312 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 B4DEV8 164 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 LINC01619G3V211 115 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 TCAPO15273 167 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 TCF21O43680 179 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 HYPMO75409 117 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 CD5P06127 495 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 OR5G3P0C626 314 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 SFTA3P0C7M3 94 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 ORM2P19652 201 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 AZU1P20160 251 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 DDTP30046 118 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 GALR1P47211 349 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 CDC34P49427 236 aaPredicted RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 TPPP2P59282 170 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 RHOBP62745 196 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 CCL20P78556 96 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 SYCNQ0VAF6 134 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 FAM78BQ5VT40 261 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 CLEC19AQ6UXS0 136 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 MRPL52Q86TS9 123 aaKnown RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 KRTAP11-1Q8IUC1 163 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 ZFP82Q8N141 532 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 OR4X2Q8NGF9 303 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 MYOZ3Q8TDC0 251 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 FAM104AQ969W3 186 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 HIST1H2BAQ96A08 127 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 NDFIP1Q9BT67 221 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 SAMD10Q9BYL1 202 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 MRPL27Q9P0M9 148 aaKnown RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 FUT9Q9Y231 359 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 S4R3C0 116 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 NSD1Q96L73 2696 aaPredicted RBP2.57□□□□□ -2
PTCD3-216ENST00000487043 MTORP42345 2549 aa2.57□□□□□ -2
PTCD3-216ENST00000487043 A0A087WWC5 75 aa2.56□□□□□ -2
PTCD3-216ENST00000487043 TRAV8-4A0A0B4J246 113 aa2.56□□□□□ -2
PTCD3-216ENST00000487043 TRAV5A0A0B4J249 113 aa2.56□□□□□ -2
PTCD3-216ENST00000487043 A0A0U1RQV1 116 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms