RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 A0A1W2PRE2 83 aa16.5■□□□□ 0.23
LIME1-206ENST00000487026 UBE2G2P60604 165 aa16.5■□□□□ 0.23
LIME1-206ENST00000487026 RHOHQ15669 191 aa16.5■□□□□ 0.23
LIME1-206ENST00000487026 BORCS7-ASMTA0A0B4J1R7 106 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 TRAV8-6A0A0B4J262 113 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 IGKV3D-20A0A0C4DH25 116 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 CIDEAO60543 219 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 IFNA7P01567 189 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 LINC01556Q5JQF7 62 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 Q6ZSN1 163 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 PTH2Q96A98 100 aa16.49■□□□□ 0.23
LIME1-206ENST00000487026 IGHV3-30P01768 117 aa16.48■□□□□ 0.23
LIME1-206ENST00000487026 IGHV3-33P01772 117 aa16.48■□□□□ 0.23
LIME1-206ENST00000487026 IGHV3-30-3P0DP02 117 aa16.48■□□□□ 0.23
LIME1-206ENST00000487026 IGHV3-30-5P0DP03 117 aa16.48■□□□□ 0.23
LIME1-206ENST00000487026 FGF8P55075 233 aaPredicted RBP16.48■□□□□ 0.23
LIME1-206ENST00000487026 ARL2-SNX15V9GYD0 113 aa16.48■□□□□ 0.23
LIME1-206ENST00000487026 FAT1Q14517 4588 aa16.48■□□□□ 0.23
LIME1-206ENST00000487026 CTXND1A0A1B0GTU2 59 aa16.47■□□□□ 0.23
LIME1-206ENST00000487026 EPM2AB3EWF7 344 aa16.47■□□□□ 0.23
LIME1-206ENST00000487026 PSCAO43653 123 aa16.47■□□□□ 0.23
LIME1-206ENST00000487026 Q9HAA7 133 aa16.47■□□□□ 0.23
LIME1-206ENST00000487026 IBA57-AS1B1ANH7 110 aa16.46■□□□□ 0.23
LIME1-206ENST00000487026 S100A4P26447 101 aaKnown RBP16.46■□□□□ 0.23
LIME1-206ENST00000487026 OR2T35Q8NGX2 323 aa16.46■□□□□ 0.23
LIME1-206ENST00000487026 ATP6V0E2Q8NHE4 81 aa16.46■□□□□ 0.23
LIME1-206ENST00000487026 FABP5P3A8MUU1 101 aa16.45■□□□□ 0.22
LIME1-206ENST00000487026 MGST1P10620 155 aaKnown RBP16.45■□□□□ 0.22
LIME1-206ENST00000487026 LELP1Q5T871 98 aa16.45■□□□□ 0.22
LIME1-206ENST00000487026 GTSF1LQ9H1H1 148 aa16.45■□□□□ 0.22
LIME1-206ENST00000487026 JPT2Q9H910 190 aa16.45■□□□□ 0.22
LIME1-206ENST00000487026 LRCOL1A6NCL2 159 aa16.44■□□□□ 0.22
LIME1-206ENST00000487026 PEX7O00628 323 aa16.44■□□□□ 0.22
LIME1-206ENST00000487026 GCSHP23434 173 aa16.44■□□□□ 0.22
LIME1-206ENST00000487026 LGALSLQ3ZCW2 172 aaPredicted RBP16.44■□□□□ 0.22
LIME1-206ENST00000487026 PARLQ9H300 379 aa16.44■□□□□ 0.22
LIME1-206ENST00000487026 FAM74A7A6NL05 159 aa16.43■□□□□ 0.22
LIME1-206ENST00000487026 Q9UF83 564 aa16.43■□□□□ 0.22
LIME1-206ENST00000487026 GAGE12JA6NER3 117 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 ASIPP42127 132 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 CRIP1P50238 77 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 GAGE1Q13065 139 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 GAGE4Q13068 117 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 GAGE5Q13069 117 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 GAGE13Q4V321 117 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 AKR1C8PQ5T2L2 129 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 Q86TA4 180 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 Q8N3U1 123 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 SAMD10Q9BYL1 202 aa16.42■□□□□ 0.22
LIME1-206ENST00000487026 A8MWV9 139 aa16.41■□□□□ 0.22
LIME1-206ENST00000487026 B4DEV8 164 aa16.41■□□□□ 0.22
LIME1-206ENST00000487026 G3V3Q6 166 aa16.41■□□□□ 0.22
LIME1-206ENST00000487026 Q6ZNX1 250 aa16.41■□□□□ 0.22
LIME1-206ENST00000487026 ZC2HC1AQ96GY0 325 aa16.41■□□□□ 0.22
LIME1-206ENST00000487026 IGLV5-52A0A0A0MRZ9 124 aa16.4■□□□□ 0.22
LIME1-206ENST00000487026 HAMPP81172 84 aa16.4■□□□□ 0.22
LIME1-206ENST00000487026 ZFP2Q6ZN57 461 aa16.4■□□□□ 0.22
LIME1-206ENST00000487026 VPS13BQ7Z7G8 4022 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 GRIFINA4D1Z8 144 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 H3BVH4 76 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 M0R036 132 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 SMR3BP02814 79 aaPredicted RBP16.39■□□□□ 0.21
LIME1-206ENST00000487026 DMRTA1Q5VZB9 504 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 C14orf178Q8N769 122 aaPredicted RBP16.39■□□□□ 0.21
LIME1-206ENST00000487026 HIST1H2BAQ96A08 127 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 NKX6-2Q9C056 277 aaPredicted RBP16.39■□□□□ 0.21
LIME1-206ENST00000487026 CYTL1Q9NRR1 136 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 IL36BQ9NZH7 164 aa16.39■□□□□ 0.21
LIME1-206ENST00000487026 MAP1LC3B2A6NCE7 125 aa16.38■□□□□ 0.21
LIME1-206ENST00000487026 KRBOX1C9JBD0 128 aa16.38■□□□□ 0.21
LIME1-206ENST00000487026 ARPC5O15511 151 aa16.38■□□□□ 0.21
LIME1-206ENST00000487026 UFSP1Q6NVU6 142 aa16.38■□□□□ 0.21
LIME1-206ENST00000487026 MAP1LC3BQ9GZQ8 125 aa16.38■□□□□ 0.21
LIME1-206ENST00000487026 BOLA1Q9Y3E2 137 aa16.38■□□□□ 0.21
LIME1-206ENST00000487026 SH2D1AO60880 128 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 ARMS2P0C7Q2 107 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 INAFM2P0DMQ5 153 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 LINC00694P0DN24 101 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 PIK3CD-AS1Q5SR53 167 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 Q5VSD8 79 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 Q8N814 137 aa16.37■□□□□ 0.21
LIME1-206ENST00000487026 SMLR1H3BR10 107 aa16.36■□□□□ 0.21
LIME1-206ENST00000487026 TMSB15BA0A087X1C1 80 aa16.35■□□□□ 0.21
LIME1-206ENST00000487026 FRZBQ92765 325 aa16.35■□□□□ 0.21
LIME1-206ENST00000487026 ZFP30Q9Y2G7 519 aa16.35■□□□□ 0.21
LIME1-206ENST00000487026 FHITP49789 147 aa16.34■□□□□ 0.21
LIME1-206ENST00000487026 UBE2G1P62253 170 aa16.34■□□□□ 0.21
LIME1-206ENST00000487026 FAM162BQ5T6X4 162 aa16.34■□□□□ 0.21
LIME1-206ENST00000487026 CST9LP1Q5W188 147 aa16.34■□□□□ 0.21
LIME1-206ENST00000487026 NTN5Q8WTR8 489 aaPredicted RBP16.34■□□□□ 0.21
LIME1-206ENST00000487026 FMC1Q96HJ9 113 aa16.34■□□□□ 0.21
LIME1-206ENST00000487026 DNAH8Q96JB1 4490 aa16.34■□□□□ 0.21
LIME1-206ENST00000487026 DNLZQ5SXM8 178 aa16.33■□□□□ 0.2
LIME1-206ENST00000487026 FAM74A4Q5TZK3 123 aa16.33■□□□□ 0.2
LIME1-206ENST00000487026 COX8CQ7Z4L0 72 aa16.33■□□□□ 0.2
LIME1-206ENST00000487026 DAZ4Q86SG3 579 aaKnown RBP16.33■□□□□ 0.2
LIME1-206ENST00000487026 SYT8Q8NBV8 401 aa16.33■□□□□ 0.2
LIME1-206ENST00000487026 OR11H4Q8NGC9 324 aa16.33■□□□□ 0.2
LIME1-206ENST00000487026 DAZ3Q9NR90 486 aaKnown RBP16.33■□□□□ 0.2
LIME1-206ENST00000487026 A0A087WWL8 130 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms