RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 EDA2RQ9HAV5 297 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
HDAC6-229ENST00000486665 C7orf77A4D0Y5 90 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 SNURFLB1AK76 121 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 MT-ND4LP03901 98 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 IGLC6P0CF74 106 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 CT83Q5H943 113 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 CELA1Q9UNI1 258 aa9.12□□□□□ -0.95
HDAC6-229ENST00000486665 MUC21A0A0G2JKD1 596 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 MUC21A0A140T8X8 626 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 XKRY2A2RUG3 117 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 A8MWL6 223 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 SPINK4O60575 86 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 DAZ2Q13117 558 aaKnown RBP9.11□□□□□ -0.95
HDAC6-229ENST00000486665 FAM222AQ5U5X8 452 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 ATRAIDQ6UW56 229 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 TSKUQ8WUA8 353 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 ANAPC16Q96DE5 110 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 SSBP4Q9BWG4 385 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-229ENST00000486665 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
HDAC6-229ENST00000486665 IL36BQ9NZH7 164 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 DKK2Q9UBU2 259 aa9.11□□□□□ -0.95
HDAC6-229ENST00000486665 PPP1R2P9O14990 202 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 SNAI2O43623 268 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 SSTP61278 116 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 Q6ZTI0 123 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 SVBPQ8N300 66 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 FER1L6-AS1Q8NA97 138 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 SPXQ9BT56 116 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 TPPP3Q9BW30 176 aa9.1□□□□□ -0.95
HDAC6-229ENST00000486665 MRPL16Q9NX20 251 aaKnown RBP9.1□□□□□ -0.95
HDAC6-229ENST00000486665 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 M0R2P5 195 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 OR5AL1P0C617 328 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 MED14OSP0DP75 135 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 FOXA3P55318 350 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-229ENST00000486665 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 PGLYRP4Q96LB8 373 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 RPS10P5Q9NQ39 176 aa9.09□□□□□ -0.95
HDAC6-229ENST00000486665 A0A1W2PPQ1 181 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 GAGE12BA1L429 117 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 GAGE7O76087 117 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 SNAPINO95295 136 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 RHEBQ15382 184 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 LINC00612Q8N6U2 182 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 NUP35Q8NFH5 326 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 PTH2Q96A98 100 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 CTDSP1Q9GZU7 261 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 GFRA4Q9GZZ7 299 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 PHLDA3Q9Y5J5 127 aa9.08□□□□□ -0.96
HDAC6-229ENST00000486665 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 CXorf65A6NEN9 183 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 HIGD1CA8MV81 97 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 F2Z2F3 143 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 M0R381 172 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 DEFB130BP0DP73 79 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 DEFB130AP0DP74 79 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 CTRLP40313 264 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 FAM3BP58499 235 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-229ENST00000486665 LGALS9BQ3B8N2 356 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 RASL10AQ92737 203 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 MSRB1Q9NZV6 116 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 FRAS1Q86XX4 4008 aa9.07□□□□□ -0.96
HDAC6-229ENST00000486665 MUC4Q99102 2169 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 A0A087WWC5 75 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 NXPH4O95158 308 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 NANOS2P60321 138 aaKnown RBP9.06□□□□□ -0.96
HDAC6-229ENST00000486665 WDR73Q6P4I2 378 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 POM121L12Q8N7R1 296 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 JPT2Q9H910 190 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 NAT8BQ9UHF3 227 aa9.06□□□□□ -0.96
HDAC6-229ENST00000486665 IGHV4-4A0A075B6R2 117 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 CACNG7P62955 275 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 SPANXN1Q5VSR9 72 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 ZFP82Q8N141 532 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
HDAC6-229ENST00000486665 RS1O15537 224 aa9.04□□□□□ -0.96
HDAC6-229ENST00000486665 NTF3P20783 257 aa9.04□□□□□ -0.96
HDAC6-229ENST00000486665 DAD1P61803 113 aa9.04□□□□□ -0.96
HDAC6-229ENST00000486665 TWIST1Q15672 202 aa9.04□□□□□ -0.96
HDAC6-229ENST00000486665 IMMP2LQ96T52 175 aa9.04□□□□□ -0.96
HDAC6-229ENST00000486665 SAMD10Q9BYL1 202 aa9.04□□□□□ -0.96
HDAC6-229ENST00000486665 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
HDAC6-229ENST00000486665 A0A1B0GUT8 65 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms