RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 KNCNA6PVL3 124 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 SERF1AO75920 110 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 AMBPP02760 352 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 OR10D4PQ8NGN7 298 aa10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-204ENST00000486319 H3BVH4 76 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 M0R2Z0 102 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 IGLV1-51P01701 117 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 SMIM6P0DI80 62 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 TDRG1Q3Y452 100 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 SMIM15Q7Z3B0 74 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 ZMAT5Q9UDW3 170 aaKnown RBP10.77□□□□□ -0.69
POLR2J3-204ENST00000486319 NUPR1O60356 82 aa10.76□□□□□ -0.69
POLR2J3-204ENST00000486319 LINC00310P59036 64 aa10.76□□□□□ -0.69
POLR2J3-204ENST00000486319 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
POLR2J3-204ENST00000486319 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
POLR2J3-204ENST00000486319 MRAPQ8TCY5 172 aa10.76□□□□□ -0.69
POLR2J3-204ENST00000486319 CLUHP3Q96NS8 147 aa10.76□□□□□ -0.69
POLR2J3-204ENST00000486319 TRAV12-2A0A075B6T6 113 aa10.75□□□□□ -0.69
POLR2J3-204ENST00000486319 ODF3L2Q3SX64 289 aa10.75□□□□□ -0.69
POLR2J3-204ENST00000486319 AMN1Q8IY45 258 aa10.75□□□□□ -0.69
POLR2J3-204ENST00000486319 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
POLR2J3-204ENST00000486319 MSRB1Q9NZV6 116 aa10.75□□□□□ -0.69
POLR2J3-204ENST00000486319 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 GNRH2O43555 120 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 INSL3P51460 131 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 IQCJQ1A5X6 159 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 RCHY1Q96PM5 261 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 IGHV1OR15-1A0A075B7D0 117 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 PPBPP02775 128 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 CD7P09564 240 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 RNASE3P12724 160 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 ZNF124Q15973 351 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 MRPL51Q4U2R6 128 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 ORMDL3Q8N138 153 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 FAM110AQ9BQ89 295 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 SAMD10Q9BYL1 202 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 TIMM8BQ9Y5J9 83 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 U3KQK5 164 aa10.74□□□□□ -0.69
POLR2J3-204ENST00000486319 C12orf57Q99622 126 aa10.73□□□□□ -0.69
POLR2J3-204ENST00000486319 RBMY1BA6NDE4 496 aaKnown RBP10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 RBMY1EA6NEQ0 496 aaKnown RBP10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 D6R8Y8 96 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 CRXO43186 299 aaPredicted RBP10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 RBMY1DP0C7P1 496 aaKnown RBP10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 RAB4AP20338 218 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 CKS2P33552 79 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 DEFB121Q5J5C9 76 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 NIT1Q86X76 327 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 STHQ8IWL8 128 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 CHCHD1Q96BP2 118 aaKnown RBP10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 PRELID3AQ96N28 172 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
POLR2J3-204ENST00000486319 TRGV11A0A075B6L2 103 aa10.71□□□□□ -0.69
POLR2J3-204ENST00000486319 K7EIL1 84 aa10.71□□□□□ -0.69
POLR2J3-204ENST00000486319 M0R381 172 aa10.71□□□□□ -0.69
POLR2J3-204ENST00000486319 HSBP1O75506 76 aa10.71□□□□□ -0.69
POLR2J3-204ENST00000486319 FXYD7P58549 80 aa10.71□□□□□ -0.69
POLR2J3-204ENST00000486319 DNAH3Q8TD57 4116 aa10.71□□□□□ -0.7
POLR2J3-204ENST00000486319 MUC4Q99102 2169 aa10.7□□□□□ -0.7
POLR2J3-204ENST00000486319 EVI2AP22794 236 aa10.7□□□□□ -0.7
POLR2J3-204ENST00000486319 AMTP48728 403 aa10.7□□□□□ -0.7
POLR2J3-204ENST00000486319 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
POLR2J3-204ENST00000486319 LAMTOR2Q9Y2Q5 125 aa10.7□□□□□ -0.7
POLR2J3-204ENST00000486319 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
POLR2J3-204ENST00000486319 NXPH4O95158 308 aa10.69□□□□□ -0.7
POLR2J3-204ENST00000486319 LINC00614P0C842 121 aa10.69□□□□□ -0.7
POLR2J3-204ENST00000486319 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
POLR2J3-204ENST00000486319 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-204ENST00000486319 Q8N1Y9 231 aa10.69□□□□□ -0.7
POLR2J3-204ENST00000486319 INSP01308 110 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 PMCHP20382 165 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 NUTF2P61970 127 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 JOSD1Q15040 202 aaPredicted RBP10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 C9orf85Q96MD7 179 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 AP1S3Q96PC3 154 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 TGP01266 2768 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 CBY3A6NI87 242 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 SYT8Q8NBV8 401 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 PRSS3P2Q8NHM4 247 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
POLR2J3-204ENST00000486319 MRAP2Q96G30 205 aa10.67□□□□□ -0.7
POLR2J3-204ENST00000486319 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
POLR2J3-204ENST00000486319 SMKR1H3BMG3 65 aa10.66□□□□□ -0.7
POLR2J3-204ENST00000486319 NCR2O95944 276 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms