RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 LINC01006Q8NI28 216 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 ZNF747Q9BV97 191 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 HIVEP2P31629 2446 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 FASNP49327 2511 aaKnown RBP8.89□□□□□ -0.99
PKP4-213ENST00000486254 A0A096LNJ9 63 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 OR4C46A6NHA9 309 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 TMEM61Q8N0U2 210 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 Q8N8P6 123 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 NRACQ8N912 160 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 OR2K2Q8NGT1 345 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 DYNLRB2Q8TF09 96 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 RAX2Q96IS3 184 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 C9orf85Q96MD7 179 aa8.89□□□□□ -0.99
PKP4-213ENST00000486254 ZNF469Q96JG9 3925 aaPredicted RBP8.89□□□□□ -0.99
PKP4-213ENST00000486254 IGLV2-18A0A075B6J9 118 aa8.88□□□□□ -0.99
PKP4-213ENST00000486254 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
PKP4-213ENST00000486254 TFPI2P48307 235 aa8.88□□□□□ -0.99
PKP4-213ENST00000486254 RPL32P62910 135 aaKnown RBP8.88□□□□□ -0.99
PKP4-213ENST00000486254 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
PKP4-213ENST00000486254 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
PKP4-213ENST00000486254 MIEN1Q9BRT3 115 aa8.88□□□□□ -0.99
PKP4-213ENST00000486254 MTORP42345 2549 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 H3BMM0 161 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 CCL24O00175 119 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 NCR2O95944 276 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 PIK3CD-AS1Q5SR53 167 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 C14orf144Q96I85 54 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
PKP4-213ENST00000486254 TRGV11A0A075B6L2 103 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 IGHV3-16A0A0C4DH30 117 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 J3KRW8 73 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 FAM110AQ9BQ89 295 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 PAM16Q9Y3D7 125 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 TRAV12-3A0A0B4J271 114 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 SMKR1H3BMG3 65 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 CD28P10747 220 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 FOSL1P15407 271 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 FCER1GP30273 86 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 CMC4P56277 68 aaPredicted RBP8.86□□□□□ -0.99
PKP4-213ENST00000486254 SSTP61278 116 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 SPATA45Q537H7 98 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 MAP6D1Q9H9H5 199 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 ST20Q9HBF5 79 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 ZNF256Q9Y2P7 627 aaPredicted RBP8.86□□□□□ -0.99
PKP4-213ENST00000486254 KIF25-AS1Q9Y6Z4 181 aa8.86□□□□□ -0.99
PKP4-213ENST00000486254 GCN1Q92616 2671 aaKnown RBP8.86□□□□□ -0.99
PKP4-213ENST00000486254 MUC4Q99102 2169 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 GNRH2O43555 120 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 CD7P09564 240 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 PROK1P58294 105 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 DEFB131AP59861 70 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 LGALS9BQ3B8N2 356 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 LGALS9CQ6DKI2 356 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 PTH2Q96A98 100 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 CITED2Q99967 270 aaPredicted RBP8.85□□□□□ -0.99
PKP4-213ENST00000486254 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 UQCR10Q9UDW1 63 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 SORL1Q92673 2214 aa8.85□□□□□ -0.99
PKP4-213ENST00000486254 AKAP9Q99996 3911 aa8.84□□□□□ -0.99
PKP4-213ENST00000486254 LINC01549A6NIU2 74 aa8.84□□□□□ -0.99
PKP4-213ENST00000486254 IGLC3P0DOY3 106 aa8.84□□□□□ -0.99
PKP4-213ENST00000486254 SPINK13Q1W4C9 94 aa8.84□□□□□ -0.99
PKP4-213ENST00000486254 CD300EQ496F6 205 aaPredicted RBP8.84□□□□□ -0.99
PKP4-213ENST00000486254 ZNF705AQ6ZN79 300 aaPredicted RBP8.84□□□□□ -0.99
PKP4-213ENST00000486254 LINC00173Q6ZV60 143 aa8.84□□□□□ -0.99
PKP4-213ENST00000486254 AGRNO00468 2067 aa8.84□□□□□ -0.99
PKP4-213ENST00000486254 LINC00315P59091 139 aa8.83□□□□□ -1
PKP4-213ENST00000486254 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
PKP4-213ENST00000486254 SELENOKQ9Y6D0 94 aa8.83□□□□□ -1
PKP4-213ENST00000486254 GAS8-AS1O95177 125 aa8.82□□□□□ -1
PKP4-213ENST00000486254 LY6G6DO95868 133 aa8.82□□□□□ -1
PKP4-213ENST00000486254 SMIM17P0DL12 118 aa8.82□□□□□ -1
PKP4-213ENST00000486254 LAGE3Q14657 143 aa8.82□□□□□ -1
PKP4-213ENST00000486254 Q8N1Y9 231 aa8.82□□□□□ -1
PKP4-213ENST00000486254 RASL10AQ92737 203 aa8.82□□□□□ -1
PKP4-213ENST00000486254 IFI27L1Q96BM0 104 aa8.82□□□□□ -1
PKP4-213ENST00000486254 DUX3Q96PT4 197 aa8.82□□□□□ -1
PKP4-213ENST00000486254 EDA2RQ9HAV5 297 aa8.82□□□□□ -1
PKP4-213ENST00000486254 HECTD1Q9ULT8 2610 aa8.82□□□□□ -1
PKP4-213ENST00000486254 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
PKP4-213ENST00000486254 ATP5LO75964 103 aa8.82□□□□□ -1
PKP4-213ENST00000486254 GATA1P15976 413 aaPredicted RBP8.82□□□□□ -1
PKP4-213ENST00000486254 ORMDL2Q53FV1 153 aa8.82□□□□□ -1
PKP4-213ENST00000486254 NDUFA11Q86Y39 141 aa8.82□□□□□ -1
PKP4-213ENST00000486254 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
PKP4-213ENST00000486254 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
PKP4-213ENST00000486254 TIMM8BQ9Y5J9 83 aaPredicted RBP8.82□□□□□ -1
PKP4-213ENST00000486254 TRAV12-2A0A075B6T6 113 aa8.81□□□□□ -1
PKP4-213ENST00000486254 TRBV6-5A0A0K0K1A5 114 aa8.81□□□□□ -1
PKP4-213ENST00000486254 KNCNA6PVL3 124 aa8.81□□□□□ -1
PKP4-213ENST00000486254 HSBP1L1C9JCN9 74 aa8.81□□□□□ -1
PKP4-213ENST00000486254 G0S2P27469 103 aa8.81□□□□□ -1
PKP4-213ENST00000486254 ODF3L2Q3SX64 289 aa8.81□□□□□ -1
PKP4-213ENST00000486254 ANK3Q12955 4377 aaKnown RBP8.81□□□□□ -1
PKP4-213ENST00000486254 RBMY1BA6NDE4 496 aaKnown RBP8.8□□□□□ -1
PKP4-213ENST00000486254 RBMY1EA6NEQ0 496 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms