RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 SMIM12Q96EX1 92 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 BIN3Q9NQY0 253 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 GPX1P07203 203 aa8.82□□□□□ -1
HDAC6-227ENST00000485102 RNASE4P34096 147 aaKnown RBP8.82□□□□□ -1
HDAC6-227ENST00000485102 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC6-227ENST00000485102 ERCC8Q13216 396 aa8.82□□□□□ -1
HDAC6-227ENST00000485102 BTN1A1Q13410 526 aa8.82□□□□□ -1
HDAC6-227ENST00000485102 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
HDAC6-227ENST00000485102 RPH3ALQ9UNE2 315 aa8.82□□□□□ -1
HDAC6-227ENST00000485102 LY96Q9Y6Y9 160 aa8.82□□□□□ -1
HDAC6-227ENST00000485102 IGHV1OR15-1A0A075B7D0 117 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 A0A1B0GV50 99 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 RBFOX3A6NFN3 312 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 TMEM250H0YL14 139 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 DNAH10OSP0CZ25 163 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 FLI1Q01543 452 aaPredicted RBP8.81□□□□□ -1
HDAC6-227ENST00000485102 PEA15Q15121 130 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 EIF5A2Q9GZV4 153 aaKnown RBP8.81□□□□□ -1
HDAC6-227ENST00000485102 MSRB1Q9NZV6 116 aa8.81□□□□□ -1
HDAC6-227ENST00000485102 IGKV2-40A0A087WW87 121 aaPredicted RBP8.8□□□□□ -1
HDAC6-227ENST00000485102 RGS13O14921 159 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 EIF3GO75821 320 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC6-227ENST00000485102 IGKV2D-40P01614 121 aaPredicted RBP8.8□□□□□ -1
HDAC6-227ENST00000485102 EVI2AP22794 236 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 GCSHP23434 173 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 TMEM183BQ1AE95 376 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 SMUG1Q53HV7 270 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 C11orf52Q96A22 123 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 TREM1Q9NP99 234 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 TP53TG3Q9ULZ0 132 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 PSG8Q9UQ74 426 aa8.8□□□□□ -1
HDAC6-227ENST00000485102 TRAV21A0A0B4J279 112 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 FAM229AH3BQW9 127 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 K7EQD1 137 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 IGHV3-53P01767 116 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 CLLU1Q5K131 121 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 C10orf126Q8N4M7 172 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 RASL10AQ92737 203 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 FAM210AQ96ND0 272 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 C8orf49Q96NF6 230 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
HDAC6-227ENST00000485102 MRPL16Q9NX20 251 aaKnown RBP8.79□□□□□ -1
HDAC6-227ENST00000485102 ORM1P02763 201 aa8.78□□□□□ -1
HDAC6-227ENST00000485102 ZNF415Q09FC8 603 aa8.78□□□□□ -1
HDAC6-227ENST00000485102 FAM74A3Q4VXF1 159 aa8.78□□□□□ -1
HDAC6-227ENST00000485102 PRR9Q5T870 116 aa8.78□□□□□ -1
HDAC6-227ENST00000485102 NTN5Q8WTR8 489 aaPredicted RBP8.78□□□□□ -1
HDAC6-227ENST00000485102 KCNS1Q96KK3 526 aa8.78□□□□□ -1
HDAC6-227ENST00000485102 MED9Q9NWA0 146 aa8.78□□□□□ -1
HDAC6-227ENST00000485102 SRIP30626 198 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 TIRAPP58753 221 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 GNG5P63218 68 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 CCL20P78556 96 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 Q6AWC8 147 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 Q6ZQT7 251 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 COX8CQ7Z4L0 72 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 WFDC10BQ8IUB3 73 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 SPXQ9BT56 116 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 DNAH8Q96JB1 4490 aa8.77□□□□□ -1.01
HDAC6-227ENST00000485102 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 RAB19A4D1S5 217 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 LRCOL1A6NCL2 159 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 FABP5P3A8MUU1 101 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 LTAP01374 205 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-227ENST00000485102 PFN1P07737 140 aaKnown RBP8.76□□□□□ -1.01
HDAC6-227ENST00000485102 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 SH2D6Q7Z4S9 175 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 Q86TA4 180 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 BAGE2Q86Y30 109 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 ZNF479Q96JC4 524 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 MDFICQ9P1T7 246 aa8.76□□□□□ -1.01
HDAC6-227ENST00000485102 TRGV11A0A075B6L2 103 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 CRYGDP07320 174 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 GYPEP15421 78 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 GNG4P50150 75 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 TOR2AQ5JU69 321 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 FAM162BQ5T6X4 162 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 Q6ZSN1 163 aa8.75□□□□□ -1.01
HDAC6-227ENST00000485102 C9JCJ5 164 aa8.74□□□□□ -1.01
HDAC6-227ENST00000485102 IGLV2-11P01706 119 aa8.74□□□□□ -1.01
HDAC6-227ENST00000485102 RPL35P42766 123 aaKnown RBP8.74□□□□□ -1.01
HDAC6-227ENST00000485102 TDRG1Q3Y452 100 aa8.74□□□□□ -1.01
HDAC6-227ENST00000485102 UQCC3Q6UW78 93 aa8.74□□□□□ -1.01
HDAC6-227ENST00000485102 Q8TAT8 98 aa8.74□□□□□ -1.01
HDAC6-227ENST00000485102 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
HDAC6-227ENST00000485102 DAZAP1Q96EP5 407 aaKnown RBP8.74□□□□□ -1.01
HDAC6-227ENST00000485102 TRAV8-1A0A0A6YYK1 113 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 XKRY2A2RUG3 117 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 GCGP01275 180 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
HDAC6-227ENST00000485102 SDF2L1Q9HCN8 221 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms