RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 YPEL4Q96NS1 127 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 NDUFAF3Q9BU61 184 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 GNB1LQ9BYB4 327 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 AGPAT4-IT1Q9H0P7 198 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 SRD5A3Q9H8P0 318 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 V9GYV3 84 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 HLA-DRB4X5D2U9 266 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 STAB1Q9NY15 2570 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
SPTA1-206ENST00000484520 A0A0J9YX75 114 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 HIGD1CA8MV81 97 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 KLLNB2CW77 178 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 SH2D1AO60880 128 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 SAP30O75446 220 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 SCO1O75880 301 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 GPX1P07203 203 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 SNRPCP09234 159 aaKnown RBP3.17□□□□□ -1.9
SPTA1-206ENST00000484520 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 CTRLP40313 264 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 CDKN1BP46527 198 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 CACNG7P62955 275 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 HBBP68871 147 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 OR5I1Q13606 314 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 MORN3Q6PF18 240 aaPredicted RBP3.17□□□□□ -1.9
SPTA1-206ENST00000484520 SMIM15Q7Z3B0 74 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 GTSCR1Q86UQ5 136 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 STHQ8IWL8 128 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 TMEM61Q8N0U2 210 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 RNF182Q8N6D2 247 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.17□□□□□ -1.9
SPTA1-206ENST00000484520 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.17□□□□□ -1.9
SPTA1-206ENST00000484520 FRZBQ92765 325 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 FAM19A4Q96LR4 140 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 VGLL1Q99990 258 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 CNFNQ9BYD5 112 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 RNASE7Q9H1E1 156 aaKnown RBP3.17□□□□□ -1.9
SPTA1-206ENST00000484520 URGCP-MRPS24S4R325 110 aa3.17□□□□□ -1.9
SPTA1-206ENST00000484520 FBN1P35555 2871 aaKnown RBP3.17□□□□□ -1.9
SPTA1-206ENST00000484520 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ATRQ13535 2644 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 A0A1B0GUT8 65 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 C7orf71A4D174 169 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ZNF705FA8MVS1 300 aaPredicted RBP3.16□□□□□ -1.9
SPTA1-206ENST00000484520 PRAC2D3DTV9 90 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 H3BMM0 161 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 INSP01308 110 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ORM1P02763 201 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 S100A6P06703 90 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 OR5AL1P0C617 328 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ASIPP42127 132 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 RPS10P46783 165 aaKnown RBP3.16□□□□□ -1.9
SPTA1-206ENST00000484520 AMTP48728 403 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 TDRG1Q3Y452 100 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 DNLZQ5SXM8 178 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 FAM159AQ6UWV7 190 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 C12orf54Q6X4T0 127 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ADAMTSL5Q6ZMM2 481 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ZFAND2AQ8N6M9 145 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 FER1L6-AS1Q8NA97 138 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 NHLRC2Q8NBF2 726 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 WFDC9Q8NEX5 89 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 NUP35Q8NFH5 326 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 Q8TAT8 98 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 LINC00467Q9BRT7 94 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 TP53TG3Q9ULZ0 132 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 ZNF256Q9Y2P7 627 aaPredicted RBP3.16□□□□□ -1.9
SPTA1-206ENST00000484520 PLXNB1O43157 2135 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
SPTA1-206ENST00000484520 IGKV3-7A0A075B6H7 116 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 IGHV4-4A0A075B6R2 117 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 TGIF2-C20orf24A0A0A6YYL0 155 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 PPP1R17O96001 155 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 PPBPP02775 128 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 TRGC1P0CF51 173 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 S100A4P26447 101 aaKnown RBP3.15□□□□□ -1.91
SPTA1-206ENST00000484520 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 TFPI2P48307 235 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 DEFB131AP59861 70 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 ERCC8Q13216 396 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 ACTL10Q5JWF8 245 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 ZNF493Q6ZR52 646 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 ZFP82Q8N141 532 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 GATD1Q8NB37 220 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 SGK494Q96LW2 274 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 DUX3Q96PT4 197 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 LAMTOR2Q9Y2Q5 125 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 TRAPPC1Q9Y5R8 145 aa3.15□□□□□ -1.91
SPTA1-206ENST00000484520 KIR2DL5BA0A0G2JN68 375 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 KIR2DL5BA0A0G2JPC4 375 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 A0A1B0GXF2 115 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 SNURFLB1AK76 121 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 SNAI2O43623 268 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 NXPH4O95158 308 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 CA1P00915 261 aaPredicted RBP3.14□□□□□ -1.91
SPTA1-206ENST00000484520 APCSP02743 223 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 IGLC6P0CF74 106 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
SPTA1-206ENST00000484520 CRIP1P50238 77 aa3.14□□□□□ -1.91
SPTA1-206ENST00000484520 APOC4P55056 127 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms