RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 CLRN3Q8NCR9 226 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 STAB2Q8WWQ8 2551 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 GNRH2O43555 120 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 SPINK4O60575 86 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 ZNF80P51504 273 aaPredicted RBP6.28□□□□□ -1.4
COL8A1-207ENST00000483969 ALKAL2Q6UX46 152 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 Q6ZTI0 123 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 COX8CQ7Z4L0 72 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 TMEM183AQ8IXX5 376 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 C18orf15Q96N68 181 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
COL8A1-207ENST00000483969 AGRNO00468 2067 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 PDE6DO43924 150 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 LTAP01374 205 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 OR5I1Q13606 314 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 Q86TA4 180 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 BAGE2Q86Y30 109 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 C15orf53Q8NAA6 179 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 VAX2Q9UIW0 290 aa6.27□□□□□ -1.41
COL8A1-207ENST00000483969 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 M0R2P5 195 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 ORM1P02763 201 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 TYMSP04818 313 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 P0DMU3 169 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 FAM231AP0DMU4 169 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 FAM231CP0DMU5 169 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 MEF2BQ02080 365 aaPredicted RBP6.26□□□□□ -1.41
COL8A1-207ENST00000483969 SLAQ13239 276 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 TMEM88Q6PEY1 159 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 RASL10AQ92737 203 aa6.26□□□□□ -1.41
COL8A1-207ENST00000483969 BCL2P10415 239 aa6.25□□□□□ -1.41
COL8A1-207ENST00000483969 S100A4P26447 101 aaKnown RBP6.25□□□□□ -1.41
COL8A1-207ENST00000483969 CRIP1P50238 77 aa6.25□□□□□ -1.41
COL8A1-207ENST00000483969 C11orf52Q96A22 123 aa6.25□□□□□ -1.41
COL8A1-207ENST00000483969 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
COL8A1-207ENST00000483969 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
COL8A1-207ENST00000483969 MRPL16Q9NX20 251 aaKnown RBP6.25□□□□□ -1.41
COL8A1-207ENST00000483969 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 RBFOX3A6NFN3 312 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 B4DEV8 164 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 H3BNG1 76 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 CIDEAO60543 219 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 SH2D1AO60880 128 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 ASIPP42127 132 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 RPL35P42766 123 aaKnown RBP6.24□□□□□ -1.41
COL8A1-207ENST00000483969 ZNF674Q2M3X9 581 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 LYPD6BQ8NI32 183 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 PTH2Q96A98 100 aa6.24□□□□□ -1.41
COL8A1-207ENST00000483969 DNAH7Q8WXX0 4024 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 TRGV4A0A0C4DH28 118 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 KRBOX1C9JBD0 128 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 C9JCJ5 164 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 IGHV3-53P01767 116 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 RNF212Q495C1 297 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 ZNF876PQ49A33 203 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 DNLZQ5SXM8 178 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 UBE2DNLQ8IWF7 75 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 OR4C5Q8NGB2 326 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
COL8A1-207ENST00000483969 SMIM12Q96EX1 92 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 BIN3Q9NQY0 253 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 PRO0255Q9UI72 69 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 HHLA3Q9XRX5 114 aa6.23□□□□□ -1.41
COL8A1-207ENST00000483969 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 A0A0J9YY99 117 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 RAB19A4D1S5 217 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 M0R036 132 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 RNASE3P12724 160 aaKnown RBP6.22□□□□□ -1.41
COL8A1-207ENST00000483969 GNG4P50150 75 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 CCL18P55774 89 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 TEX261Q6UWH6 196 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 NHLRC2Q8NBF2 726 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 EIF5A2Q9GZV4 153 aaKnown RBP6.22□□□□□ -1.41
COL8A1-207ENST00000483969 IL36BQ9NZH7 164 aa6.22□□□□□ -1.41
COL8A1-207ENST00000483969 GRIFINA4D1Z8 144 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
COL8A1-207ENST00000483969 ARMS2P0C7Q2 107 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 MGST1P10620 155 aaKnown RBP6.21□□□□□ -1.42
COL8A1-207ENST00000483969 FAM3BP58499 235 aaPredicted RBP6.21□□□□□ -1.42
COL8A1-207ENST00000483969 CENPWQ5EE01 88 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 ZNF506Q5JVG8 444 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 PRR27Q6MZM9 219 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 ZNF479Q96JC4 524 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 DERL1Q9BUN8 251 aa6.21□□□□□ -1.42
COL8A1-207ENST00000483969 TMSB15BA0A087X1C1 80 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 PGPEP1LA6NFU8 196 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 A8MWV9 139 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 TMEM250H0YL14 139 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 RS1O15537 224 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 CXCL1P09341 107 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 CRYBA4P53673 196 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 RPS20P60866 119 aaKnown RBP6.2□□□□□ -1.42
COL8A1-207ENST00000483969 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms