RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TMEM160Q9NX00 188 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 FAM223BA6NKX1 122 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 K7EP34 96 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 SOCS3O14543 225 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 ATP5LO75964 103 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 FAM223AQ8IWN6 122 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 MAPKAPK5-AS1Q8N8E1 139 aa11.26□□□□□ -0.61
ATG4B-220ENST00000482507 TRBV25-1A0A075B6N4 114 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 SAP30O75446 220 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 TGFAP01135 160 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 AVPP01185 164 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-220ENST00000482507 CHAC1Q9BUX1 264 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 IGHV1-69DA0A0B4J2H0 117 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 F6UB75 175 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 K7EMI3 77 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 IGHV1-69P01742 117 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 GCSHP23434 173 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 AP1S3Q96PC3 154 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
ATG4B-220ENST00000482507 B4DSR2 109 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 K7ERJ3 54 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 SMPXQ9UHP9 88 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 A0A1W2PPM0 123 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 M0R381 172 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 LY6EQ16553 131 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 Q6ZS46 218 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 MYOZ3Q8TDC0 251 aa11.24□□□□□ -0.61
ATG4B-220ENST00000482507 GTF2H5Q6ZYL4 71 aa11.23□□□□□ -0.61
ATG4B-220ENST00000482507 RASL10AQ92737 203 aa11.23□□□□□ -0.61
ATG4B-220ENST00000482507 ATP6V0BQ99437 205 aa11.23□□□□□ -0.61
ATG4B-220ENST00000482507 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
ATG4B-220ENST00000482507 SONP18583 2426 aaKnown RBP11.23□□□□□ -0.61
ATG4B-220ENST00000482507 A0A087WX48 190 aa11.23□□□□□ -0.61
ATG4B-220ENST00000482507 RPL39LQ96EH5 51 aaKnown RBP11.23□□□□□ -0.61
ATG4B-220ENST00000482507 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
ATG4B-220ENST00000482507 ANXA2RQ3ZCQ2 193 aa11.22□□□□□ -0.61
ATG4B-220ENST00000482507 PHLDA1Q8WV24 401 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-220ENST00000482507 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
ATG4B-220ENST00000482507 LINC00477Q96M19 166 aa11.22□□□□□ -0.61
ATG4B-220ENST00000482507 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
ATG4B-220ENST00000482507 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 NDUFA4O00483 81 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 IGHV4-31P0DP07 118 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.61
ATG4B-220ENST00000482507 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 VPS25Q9BRG1 176 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 CHTOPQ9Y3Y2 248 aaKnown RBP11.21□□□□□ -0.61
ATG4B-220ENST00000482507 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 SETXQ7Z333 2677 aaKnown RBP11.21□□□□□ -0.61
ATG4B-220ENST00000482507 EDN2P20800 178 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 PSMG4Q5JS54 123 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 FAM19A4Q96LR4 140 aa11.21□□□□□ -0.61
ATG4B-220ENST00000482507 GNRH2O43555 120 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 BLCAPP62952 87 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 OR10J6PQ8NGY7 276 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 SPCS1Q9Y6A9 102 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 RNASE4P34096 147 aaKnown RBP11.2□□□□□ -0.62
ATG4B-220ENST00000482507 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
ATG4B-220ENST00000482507 OVOL1O14753 267 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
ATG4B-220ENST00000482507 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
ATG4B-220ENST00000482507 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 H3BUX3 64 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
ATG4B-220ENST00000482507 HLA-DRB4P13762 266 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 CEND1Q8N111 149 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 TM2D2Q9BX73 214 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
ATG4B-220ENST00000482507 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-220ENST00000482507 IGHG2P01859 326 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 SRD5A1P18405 259 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
ATG4B-220ENST00000482507 ASIPP42127 132 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 K7ERU9 68 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 TOMM6Q96B49 74 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
ATG4B-220ENST00000482507 PHLDA3Q9Y5J5 127 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 CR1P17927 2039 aa11.18□□□□□ -0.62
ATG4B-220ENST00000482507 A6NDX4 124 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 PF4V1P10720 104 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 CUBNO60494 3623 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 MGPP08493 103 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 FABP2P12104 132 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 PLNP26678 52 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 APRG1Q8IVJ8 170 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 NEXN-AS1Q8NBZ9 246 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
ATG4B-220ENST00000482507 RHPN1-AS1Q9BWJ2 59 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms