RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
HDAC1-208ENST00000482310 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
HDAC1-208ENST00000482310 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
HDAC1-208ENST00000482310 TEX48A0A1B0GUV7 120 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 M0R2P5 195 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 M0R381 172 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 SPINK4O60575 86 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
HDAC1-208ENST00000482310 ZNF575Q86XF7 245 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 SPXQ9BT56 116 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
HDAC1-208ENST00000482310 XKRY2A2RUG3 117 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 FAM231DQ6ZW35 169 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 FER1L6-AS1Q8NA97 138 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 OR10G8Q8NGN5 311 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 OR10AG1Q8NH19 301 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 IL36BQ9NZH7 164 aa9.39□□□□□ -0.91
HDAC1-208ENST00000482310 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
HDAC1-208ENST00000482310 MUC7Q8TAX7 377 aa9.38□□□□□ -0.91
HDAC1-208ENST00000482310 PHLDA1Q8WV24 401 aaPredicted RBP9.38□□□□□ -0.91
HDAC1-208ENST00000482310 OSTCQ9NRP0 149 aa9.38□□□□□ -0.91
HDAC1-208ENST00000482310 DEFB131BA0A096LNP1 70 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 F5H768 121 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 CXCL1P09341 107 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 DNLZQ5SXM8 178 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 SPANXN1Q5VSR9 72 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 SEC11CQ9BY50 192 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 JPT2Q9H910 190 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 V9GYV3 84 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
HDAC1-208ENST00000482310 TRAV10A0A0B4J240 114 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 A8MWL6 223 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 ATP5G1P05496 136 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-208ENST00000482310 RNF212Q495C1 297 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 FAM74A4Q5TZK3 123 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
HDAC1-208ENST00000482310 SNAI2O43623 268 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 MED14OSP0DP75 135 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 OR4C5Q8NGB2 326 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 RASL10AQ92737 203 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 ZNF479Q96JC4 524 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 RYR2Q92736 4967 aa9.35□□□□□ -0.91
HDAC1-208ENST00000482310 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 A0A087WWL8 130 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 HIGD1CA8MV81 97 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 APOC3P02656 99 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 OR5AL1P0C617 328 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 HOXA5P20719 270 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 POM121L12Q8N7R1 296 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 TSKUQ8WUA8 353 aa9.34□□□□□ -0.91
HDAC1-208ENST00000482310 DYNC2H1Q8NCM8 4307 aaKnown RBP9.34□□□□□ -0.91
HDAC1-208ENST00000482310 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 A0A0J9YY99 117 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 A0A1W2PPQ1 181 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 IGLL5B9A064 214 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 CTRLP40313 264 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 CT83Q5H943 113 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 CFAP126Q5VTH2 177 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 SSBP4Q9BWG4 385 aaPredicted RBP9.33□□□□□ -0.92
HDAC1-208ENST00000482310 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 MSRB1Q9NZV6 116 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 CARHSP1Q9Y2V2 147 aaKnown RBP9.33□□□□□ -0.92
HDAC1-208ENST00000482310 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
HDAC1-208ENST00000482310 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
HDAC1-208ENST00000482310 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
HDAC1-208ENST00000482310 RS1O15537 224 aa9.32□□□□□ -0.92
HDAC1-208ENST00000482310 MT-ND4LP03901 98 aa9.32□□□□□ -0.92
HDAC1-208ENST00000482310 TWIST1Q15672 202 aa9.32□□□□□ -0.92
HDAC1-208ENST00000482310 NDUFA5Q16718 116 aa9.32□□□□□ -0.92
HDAC1-208ENST00000482310 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
HDAC1-208ENST00000482310 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 A8MWV9 139 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 F2Z2F3 143 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 PPP1R2P9O14990 202 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 MGPP08493 103 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 NTF3P20783 257 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 CACNG7P62955 275 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 C10orf91Q5T1B1 145 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 TMEM88Q6PEY1 159 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 CEMP1Q6PRD7 247 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-208ENST00000482310 C14orf178Q8N769 122 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-208ENST00000482310 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 RPS10P5Q9NQ39 176 aa9.31□□□□□ -0.92
HDAC1-208ENST00000482310 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 NXPH4O95158 308 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms