RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
C9orf3-218ENST00000482056 NXPH4O95158 308 aa11.58□□□□□ -0.56
C9orf3-218ENST00000482056 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
C9orf3-218ENST00000482056 C2orf66Q6UXQ4 117 aa11.58□□□□□ -0.56
C9orf3-218ENST00000482056 OR11H1Q8NG94 326 aa11.58□□□□□ -0.56
C9orf3-218ENST00000482056 OR11H2Q8NH07 326 aa11.58□□□□□ -0.56
C9orf3-218ENST00000482056 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
C9orf3-218ENST00000482056 B4DSR2 109 aa11.57□□□□□ -0.56
C9orf3-218ENST00000482056 GATA3P23771 443 aa11.57□□□□□ -0.56
C9orf3-218ENST00000482056 C21orf62-AS1Q17RA5 79 aa11.57□□□□□ -0.56
C9orf3-218ENST00000482056 POM121L12Q8N7R1 296 aa11.57□□□□□ -0.56
C9orf3-218ENST00000482056 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
C9orf3-218ENST00000482056 ASH1LQ9NR48 2969 aaKnown RBP11.56□□□□□ -0.56
C9orf3-218ENST00000482056 KLLNB2CW77 178 aa11.56□□□□□ -0.56
C9orf3-218ENST00000482056 SPRY2O43597 315 aa11.56□□□□□ -0.56
C9orf3-218ENST00000482056 CFHR3Q02985 330 aa11.56□□□□□ -0.56
C9orf3-218ENST00000482056 LCNL1Q6ZST4 164 aa11.56□□□□□ -0.56
C9orf3-218ENST00000482056 CSTL1Q9H114 145 aa11.56□□□□□ -0.56
C9orf3-218ENST00000482056 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
C9orf3-218ENST00000482056 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
C9orf3-218ENST00000482056 HIST1H4GQ99525 98 aa11.56□□□□□ -0.56
C9orf3-218ENST00000482056 LINC01619G3V211 115 aa11.55□□□□□ -0.56
C9orf3-218ENST00000482056 DSCR9P59020 149 aa11.55□□□□□ -0.56
C9orf3-218ENST00000482056 Q6ZS46 218 aa11.55□□□□□ -0.56
C9orf3-218ENST00000482056 MAPKAPK5-AS1Q8N8E1 139 aa11.55□□□□□ -0.56
C9orf3-218ENST00000482056 MYMXA0A1B0GTQ4 84 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 SRD5A1P18405 259 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 BAALCQ8WXS3 180 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 NCOR2Q9Y618 2525 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 IGHV4OR15-8A0A075B7B6 117 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 A0A087WW49 117 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 CYSLTR1Q9Y271 337 aa11.54□□□□□ -0.56
C9orf3-218ENST00000482056 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
C9orf3-218ENST00000482056 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
C9orf3-218ENST00000482056 K7ERJ3 54 aa11.53□□□□□ -0.56
C9orf3-218ENST00000482056 DCANP1Q8TF63 244 aa11.53□□□□□ -0.56
C9orf3-218ENST00000482056 PHLDA1Q8WV24 401 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-218ENST00000482056 ODF3Q96PU9 254 aa11.53□□□□□ -0.56
C9orf3-218ENST00000482056 CHD8Q9HCK8 2581 aa11.53□□□□□ -0.56
C9orf3-218ENST00000482056 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.56
C9orf3-218ENST00000482056 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
C9orf3-218ENST00000482056 PRSS29PA6NIE9 313 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 E9PLD3 99 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 CD7P09564 240 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 PSMB8P28062 276 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 SNRPD3P62318 126 aaKnown RBP11.52□□□□□ -0.57
C9orf3-218ENST00000482056 SCGB2A2Q13296 93 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
C9orf3-218ENST00000482056 VCYO14598 125 aa11.51□□□□□ -0.57
C9orf3-218ENST00000482056 NEGR1Q7Z3B1 354 aa11.51□□□□□ -0.57
C9orf3-218ENST00000482056 TRAV12-3A0A0B4J271 114 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 F5H697 171 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 LINC00315P59091 139 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 C12orf74Q32Q52 190 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 SYT8Q8NBV8 401 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 IGLL5B9A064 214 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 SAP30O75446 220 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 HERVK_113P61574 105 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
C9orf3-218ENST00000482056 TRBV7-3A0A075B6L6 115 aa11.49□□□□□ -0.57
C9orf3-218ENST00000482056 COTL1Q14019 142 aa11.49□□□□□ -0.57
C9orf3-218ENST00000482056 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
C9orf3-218ENST00000482056 PRADC1Q9BSG0 188 aa11.49□□□□□ -0.57
C9orf3-218ENST00000482056 MUC4Q99102 2169 aa11.49□□□□□ -0.57
C9orf3-218ENST00000482056 G3V4G9 280 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 AVPP01185 164 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
C9orf3-218ENST00000482056 TMEM95Q3KNT9 176 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 ZFP2Q6ZN57 461 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 TP53TG1Q9Y2A0 90 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 SVEP1Q4LDE5 3571 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 ITPR1Q14643 2758 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
C9orf3-218ENST00000482056 LINC01356Q8N9X3 169 aa11.48□□□□□ -0.57
C9orf3-218ENST00000482056 A0A087WWL8 130 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 TMEM238LA0A1B0GVL6 79 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 A6NJY4 79 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 LGALS9O00182 355 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 IGHV4-59P01825 116 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
C9orf3-218ENST00000482056 ZNF688P0C7X2 276 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 EDN2P20800 178 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 DEFB112Q30KQ8 113 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 A0A0J9YX75 114 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 ZNF815PA8K554 130 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 J3QLI3 93 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 PMVKQ15126 192 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 WFDC12Q8WWY7 111 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 C9orf85Q96MD7 179 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 TIMM17AQ99595 171 aa11.47□□□□□ -0.57
C9orf3-218ENST00000482056 IGHV3-16A0A0C4DH30 117 aa11.46□□□□□ -0.58
C9orf3-218ENST00000482056 TRBV6-5A0A0K0K1A5 114 aa11.46□□□□□ -0.58
C9orf3-218ENST00000482056 A0A1B0GWB2 263 aa11.46□□□□□ -0.58
C9orf3-218ENST00000482056 SDHAF1A6NFY7 115 aa11.46□□□□□ -0.58
C9orf3-218ENST00000482056 JPT2Q9H910 190 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms