RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 LCN12Q6JVE5 192 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 FAM19A5Q7Z5A7 132 aaPredicted RBP8.7□□□□□ -1.02
HPS4-212ENST00000481910 PMCHL2Q9BQD1 86 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 SLC25A2Q9BXI2 301 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 Q6Q795 121 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 LCN15Q6UWW0 184 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 MBD3L1Q8WWY6 194 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 SMAD5-AS1Q9Y6J3 95 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 SORL1Q92673 2214 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 Q0VG73 95 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 WFDC3Q8IUB2 231 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 MS4A6AQ9H2W1 248 aa8.69□□□□□ -1.02
HPS4-212ENST00000481910 CTXND1A0A1B0GTU2 59 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 MRPS12O15235 138 aaKnown RBP8.68□□□□□ -1.02
HPS4-212ENST00000481910 PYYP10082 97 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 ZNF726P1Q15940 193 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 TMEM14CQ9P0S9 112 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 TRRAPQ9Y4A5 3859 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 RHODO00212 210 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 GP9P14770 177 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 NTF3P20783 257 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 KIAA1644Q3SXP7 199 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 PQLC2Q6ZP29 291 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 OR10AG1Q8NH19 301 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
HPS4-212ENST00000481910 ARL14EPLP0DKL9 152 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 MALP21145 153 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 EMP1P54849 157 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 ZNF415Q09FC8 603 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 ZNF503Q96F45 646 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
HPS4-212ENST00000481910 C9JAW5 83 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 H3BTX0 84 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 CXorf1O96002 111 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 HBE1P02100 147 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
HPS4-212ENST00000481910 Q6AWC8 147 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 DCANP1Q8TF63 244 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 MANBALQ9NQG1 85 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 A0A087X0K7 114 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 K7EN84 100 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 GPX1P07203 203 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 FABP2P12104 132 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 NDUFV3P56181 108 aaKnown RBP8.66□□□□□ -1.02
HPS4-212ENST00000481910 EGFEM1PQ0D2K5 195 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 Q6ZUT4 128 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 TMEM256Q8N2U0 113 aa8.66□□□□□ -1.02
HPS4-212ENST00000481910 ZNF256Q9Y2P7 627 aaPredicted RBP8.66□□□□□ -1.02
HPS4-212ENST00000481910 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 MUC21A0A0G2JKD1 596 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 MUC21A0A140T8X8 626 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 K7EQG2 157 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 MUC21Q5SSG8 566 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 C18orf32Q8TCD1 76 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
HPS4-212ENST00000481910 TRBV19A0A075B6N1 114 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 A0A1B0GV50 99 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 TMEM262E9PQX1 116 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 GCHFRP30047 84 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 KRTAP10-11P60412 298 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 BEAN1Q3B7T3 259 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 CYB561D1Q8N8Q1 229 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 A0A1W2PPM0 123 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 ISLRO14498 428 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 SOCS3O14543 225 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 CD7P09564 240 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 IFITM1P13164 125 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
HPS4-212ENST00000481910 MEIG1Q5JSS6 88 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 IGFL4Q6B9Z1 124 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 GTSCR1Q86UQ5 136 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
HPS4-212ENST00000481910 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 ZNF688P0C7X2 276 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 PDE6HQ13956 83 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 PRR25Q96S07 402 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 ZNF331Q9NQX6 463 aaPredicted RBP8.63□□□□□ -1.03
HPS4-212ENST00000481910 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
HPS4-212ENST00000481910 YTHDF2Q9Y5A9 579 aaKnown RBP8.63□□□□□ -1.03
HPS4-212ENST00000481910 TRAV9-1A0A075B6T8 112 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 NDUFB4O95168 129 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 PSMB3P49720 205 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms