RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 SPANXN1Q5VSR9 72 aa13.86□□□□□ -0.19
MRPL28-209ENST00000481453 TEX29Q8N6K0 151 aa13.86□□□□□ -0.19
MRPL28-209ENST00000481453 TMEM158Q8WZ71 300 aa13.86□□□□□ -0.19
MRPL28-209ENST00000481453 FLNAP21333 2647 aaKnown RBP13.85□□□□□ -0.19
MRPL28-209ENST00000481453 SIVA1O15304 175 aa13.85□□□□□ -0.19
MRPL28-209ENST00000481453 DEFB1P60022 68 aa13.85□□□□□ -0.19
MRPL28-209ENST00000481453 RPL11P62913 178 aaKnown RBP13.85□□□□□ -0.19
MRPL28-209ENST00000481453 PCP2Q8IVA1 136 aa13.85□□□□□ -0.19
MRPL28-209ENST00000481453 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
MRPL28-209ENST00000481453 TRAV8-6A0A0B4J262 113 aa13.84□□□□□ -0.19
MRPL28-209ENST00000481453 TLN2Q9Y4G6 2542 aa13.84□□□□□ -0.19
MRPL28-209ENST00000481453 SRD5A1P18405 259 aa13.84□□□□□ -0.19
MRPL28-209ENST00000481453 HSD52Q0P140 79 aa13.84□□□□□ -0.19
MRPL28-209ENST00000481453 ODF1Q14990 250 aa13.84□□□□□ -0.19
MRPL28-209ENST00000481453 IGLV2-18A0A075B6J9 118 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 TRAV26-2A0A0B4J265 109 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 A6NDN8 102 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 PRR9Q5T870 116 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 DNAJC9-AS1A6NH13 148 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 OVOL1O14753 267 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 C18orf65Q6ZTR6 163 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 DCANP1Q8TF63 244 aa13.83□□□□□ -0.2
MRPL28-209ENST00000481453 H3BVH4 76 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 SYNJ2BPP57105 145 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 ADAMTSL5Q6ZMM2 481 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 NRACQ8N912 160 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 ZMAT4Q9H898 229 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 J3KRW8 73 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 LGALS9O00182 355 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 HOXD3P31249 432 aaPredicted RBP13.82□□□□□ -0.2
MRPL28-209ENST00000481453 ESM1Q9NQ30 184 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 LENEPQ9Y5L5 61 aa13.82□□□□□ -0.2
MRPL28-209ENST00000481453 UNC79Q9P2D8 2635 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 ITPR2Q14571 2701 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 F6UB75 175 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 SMIM17P0DL12 118 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 TCTEX1D4Q5JR98 221 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 PSMG4Q5JS54 123 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 LINC00477Q96M19 166 aa13.81□□□□□ -0.2
MRPL28-209ENST00000481453 ATP5LO75964 103 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 IGKCP01834 107 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 RBX1P62877 108 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 LAGE3Q14657 143 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 Q6ZSV7 163 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 ZFAND2AQ8N6M9 145 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 OR10J6PQ8NGY7 276 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 FAM19A4Q96LR4 140 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 AP1S3Q96PC3 154 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 HHLA3Q9XRX5 114 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 H3BRM9 83 aa13.8□□□□□ -0.2
MRPL28-209ENST00000481453 SONP18583 2426 aaKnown RBP13.8□□□□□ -0.2
MRPL28-209ENST00000481453 AKAP9Q99996 3911 aa13.79□□□□□ -0.2
MRPL28-209ENST00000481453 PRSS47A8MTI9 375 aa13.79□□□□□ -0.2
MRPL28-209ENST00000481453 IGKV2D-26A0A0A0MRZ7 120 aa13.79□□□□□ -0.2
MRPL28-209ENST00000481453 KIR3DS1Q14943 382 aa13.79□□□□□ -0.2
MRPL28-209ENST00000481453 DEFB136Q30KP8 78 aa13.79□□□□□ -0.2
MRPL28-209ENST00000481453 YAE1D1Q9NRH1 226 aa13.79□□□□□ -0.2
MRPL28-209ENST00000481453 C9orf118A6NHY6 69 aa13.78□□□□□ -0.2
MRPL28-209ENST00000481453 DPM2O94777 84 aa13.78□□□□□ -0.2
MRPL28-209ENST00000481453 MRAP2Q96G30 205 aa13.77□□□□□ -0.21
MRPL28-209ENST00000481453 CST9LQ9H4G1 147 aa13.77□□□□□ -0.21
MRPL28-209ENST00000481453 TRAV21A0A0B4J279 112 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 GTSCR1Q86UQ5 136 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 TMEM160Q9NX00 188 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 M0R381 172 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 S100A4P26447 101 aaKnown RBP13.76□□□□□ -0.21
MRPL28-209ENST00000481453 SLURP1P55000 103 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 SAMD13Q5VXD3 122 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 TTTY13Q9BZ97 58 aa13.76□□□□□ -0.21
MRPL28-209ENST00000481453 GAGE12BA1L429 117 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 H3BUT2 72 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 APRG1Q8IVJ8 170 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 GCN1Q92616 2671 aaKnown RBP13.75□□□□□ -0.21
MRPL28-209ENST00000481453 SPRY2O43597 315 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 ID1P41134 155 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 CDKN1BP46527 198 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 HIST2H2BDQ6DRA6 164 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 C4orf3Q8WVX3 66 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 RAB37Q96AX2 223 aa13.75□□□□□ -0.21
MRPL28-209ENST00000481453 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
MRPL28-209ENST00000481453 K7EQG2 157 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 RNF151Q2KHN1 245 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 GTF2H5Q6ZYL4 71 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 NAA38Q9BRA0 125 aaKnown RBP13.74□□□□□ -0.21
MRPL28-209ENST00000481453 ANK3Q12955 4377 aaKnown RBP13.74□□□□□ -0.21
MRPL28-209ENST00000481453 TRBV7-9A0A0J9YWB2 115 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 ASIPP42127 132 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 PCP4P48539 62 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 SMIM2Q9BVW6 85 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 HIGD1BQ9P298 99 aa13.74□□□□□ -0.21
MRPL28-209ENST00000481453 RNASE4P34096 147 aaKnown RBP13.73□□□□□ -0.21
MRPL28-209ENST00000481453 PHLDA3Q9Y5J5 127 aa13.73□□□□□ -0.21
MRPL28-209ENST00000481453 ACANP16112 2415 aa13.73□□□□□ -0.21
MRPL28-209ENST00000481453 LINC01619G3V211 115 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 GCSHP23434 173 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 ANXA2RQ3ZCQ2 193 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms