RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 ZNF253O75346 499 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 BCL2P10415 239 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 RANP62826 216 aaKnown RBP11.56□□□□□ -0.56
RXRB-203ENST00000481441 TOR2AQ5JU69 321 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 Q6ZQT7 251 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 ZNF479Q96JC4 524 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
RXRB-203ENST00000481441 IGHV1OR15-1A0A075B7D0 117 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 RBFOX3A6NFN3 312 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 ORM1P02763 201 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 GPX1P07203 203 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 ZNF415Q09FC8 603 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 PDE6HQ13956 83 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 PRR9Q5T870 116 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 COMMD7Q86VX2 200 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 ARL2-SNX15V9GYD0 113 aa11.55□□□□□ -0.56
RXRB-203ENST00000481441 IGHV3-38A0A0C4DH36 116 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 A0A1W2PRE2 83 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 IBA57-AS1B1ANH7 110 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 GGTLC3B5MD39 225 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 SRSF3P84103 164 aaKnown RBP11.54□□□□□ -0.56
RXRB-203ENST00000481441 ZNF506Q5JVG8 444 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 CST9LP1Q5W188 147 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 TXNDC17Q9BRA2 123 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 EIF5A2Q9GZV4 153 aaKnown RBP11.54□□□□□ -0.56
RXRB-203ENST00000481441 VAX2Q9UIW0 290 aa11.54□□□□□ -0.56
RXRB-203ENST00000481441 OXTP01178 125 aa11.53□□□□□ -0.56
RXRB-203ENST00000481441 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
RXRB-203ENST00000481441 LINC01556Q5JQF7 62 aa11.53□□□□□ -0.56
RXRB-203ENST00000481441 C9orf47Q6ZRZ4 202 aa11.53□□□□□ -0.56
RXRB-203ENST00000481441 RAB19A4D1S5 217 aa11.52□□□□□ -0.57
RXRB-203ENST00000481441 PGPA6NDG6 321 aa11.52□□□□□ -0.57
RXRB-203ENST00000481441 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
RXRB-203ENST00000481441 SUMO1P63165 101 aaKnown RBP11.52□□□□□ -0.57
RXRB-203ENST00000481441 MEF2BQ02080 365 aaPredicted RBP11.52□□□□□ -0.57
RXRB-203ENST00000481441 Q9HAA7 133 aa11.52□□□□□ -0.57
RXRB-203ENST00000481441 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
RXRB-203ENST00000481441 PRELID1Q9Y255 219 aa11.52□□□□□ -0.57
RXRB-203ENST00000481441 TIRAPP58753 221 aa11.51□□□□□ -0.57
RXRB-203ENST00000481441 WFDC2Q14508 124 aa11.51□□□□□ -0.57
RXRB-203ENST00000481441 AAMDCQ9H7C9 122 aa11.51□□□□□ -0.57
RXRB-203ENST00000481441 C9JCJ5 164 aa11.5□□□□□ -0.57
RXRB-203ENST00000481441 C9JQL5 133 aa11.5□□□□□ -0.57
RXRB-203ENST00000481441 PEA15Q15121 130 aa11.5□□□□□ -0.57
RXRB-203ENST00000481441 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
RXRB-203ENST00000481441 RASL10AQ92737 203 aa11.5□□□□□ -0.57
RXRB-203ENST00000481441 NKX6-2Q9C056 277 aaPredicted RBP11.5□□□□□ -0.57
RXRB-203ENST00000481441 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
RXRB-203ENST00000481441 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
RXRB-203ENST00000481441 LOC100131303A0A0U1RQF7 123 aa11.49□□□□□ -0.57
RXRB-203ENST00000481441 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
RXRB-203ENST00000481441 GNG5P63218 68 aa11.49□□□□□ -0.57
RXRB-203ENST00000481441 NDUFA5Q16718 116 aa11.49□□□□□ -0.57
RXRB-203ENST00000481441 SCXQ7RTU7 201 aa11.49□□□□□ -0.57
RXRB-203ENST00000481441 TREM1Q9NP99 234 aa11.49□□□□□ -0.57
RXRB-203ENST00000481441 SCO2A0A1W2PP80 73 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 SRP19P09132 144 aaKnown RBP11.48□□□□□ -0.57
RXRB-203ENST00000481441 TMEM78Q5T7P6 136 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 SH2D6Q7Z4S9 175 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 C5orf17Q8NAS9 161 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 RPH3ALQ9UNE2 315 aa11.48□□□□□ -0.57
RXRB-203ENST00000481441 PDE6DO43924 150 aa11.47□□□□□ -0.57
RXRB-203ENST00000481441 UQCC3Q6UW78 93 aa11.47□□□□□ -0.57
RXRB-203ENST00000481441 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
RXRB-203ENST00000481441 EPDR1Q9UM22 224 aa11.47□□□□□ -0.57
RXRB-203ENST00000481441 F6UZH7 168 aa11.46□□□□□ -0.57
RXRB-203ENST00000481441 PEX7O00628 323 aa11.46□□□□□ -0.57
RXRB-203ENST00000481441 MUC21Q5SSG8 566 aa11.46□□□□□ -0.57
RXRB-203ENST00000481441 C11orf52Q96A22 123 aa11.46□□□□□ -0.57
RXRB-203ENST00000481441 SPXQ9BT56 116 aa11.46□□□□□ -0.57
RXRB-203ENST00000481441 TRAV4A0A0B4J268 109 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 TRBV7-9A0A0J9YWB2 115 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
RXRB-203ENST00000481441 TCRAP04437 139 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 CSN1S1P47710 185 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 CEBPGP53567 150 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 CYB561D1Q8N8Q1 229 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 TCEAL7Q9BRU2 100 aa11.45□□□□□ -0.58
RXRB-203ENST00000481441 TRAV8-6A0A0B4J262 113 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 IGHV3-30P01768 117 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 IGHV3-30-3P0DP02 117 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 IGHV3-30-5P0DP03 117 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 ZNF138P52744 262 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 GOLT1AQ6ZVE7 132 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 Q8TAT8 98 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 HIST1H2BAQ96A08 127 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 TM2D2Q9BX73 214 aa11.44□□□□□ -0.58
RXRB-203ENST00000481441 LAGE3Q14657 143 aa11.43□□□□□ -0.58
RXRB-203ENST00000481441 LINC01620Q4KN68 170 aa11.43□□□□□ -0.58
RXRB-203ENST00000481441 ARL6IP6Q8N6S5 226 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms