RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZNF415Q09FC8 603 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 ZNF726P1Q15940 193 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 C10orf25Q5T742 122 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 FAM122CQ6P4D5 195 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 FAM159AQ6UWV7 190 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 LINC00336Q6ZUF6 198 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 SH2D6Q7Z4S9 175 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 SLC51BQ86UW2 128 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 FMC1Q96HJ9 113 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 SH3BGRL3Q9H299 93 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 KMT2AQ03164 3969 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 TRAV12-3A0A0B4J271 114 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 MAP1LC3B2A6NCE7 125 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 ZNF705GA8MUZ8 300 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-213ENST00000480102 IGLL5B9A064 214 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 USP17L23D6RBM5 183 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 H3BTX0 84 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 DEFB4AO15263 64 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 LTAP01374 205 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 ORM1P02763 201 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 SULT1A2P50226 295 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 CD300CQ08708 224 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 TMEM183BQ1AE95 376 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 ZFP69Q49AA0 526 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 SMUG1Q53HV7 270 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 ZFP2Q6ZN57 461 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 LYPD6BQ8NI32 183 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 C11orf52Q96A22 123 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 MAP1LC3BQ9GZQ8 125 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 MANBALQ9NQG1 85 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 PSG8Q9UQ74 426 aa3.42□□□□□ -1.86
PTCD3-213ENST00000480102 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 TRAV4A0A0B4J268 109 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 FABP5P3A8MUU1 101 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 M0R2P5 195 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 RHODO00212 210 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 PEX7O00628 323 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 RNASE4P34096 147 aaKnown RBP3.41□□□□□ -1.86
PTCD3-213ENST00000480102 FXYD7P58549 80 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 ERCC8Q13216 396 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 BTN1A1Q13410 526 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 PRR9Q5T870 116 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 Q6ZR54 194 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 GOLT1AQ6ZVE7 132 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 TMUB2Q71RG4 321 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 TVP23CQ96ET8 276 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 ZNF471Q9BX82 626 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-213ENST00000480102 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 TREM1Q9NP99 234 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 NOP10Q9NPE3 64 aaKnown RBP3.41□□□□□ -1.86
PTCD3-213ENST00000480102 SCRT2Q9NQ03 307 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 IL36BQ9NZH7 164 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 DYNC1H1Q14204 4646 aaKnown RBP3.41□□□□□ -1.86
PTCD3-213ENST00000480102 HYDINQ4G0P3 5121 aa3.41□□□□□ -1.86
PTCD3-213ENST00000480102 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 TRBV6-4A0A1B0GX49 114 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 PDE6DO43924 150 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 PFDN1O60925 122 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 LY6G6CO95867 125 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 SNRPCP09234 159 aaKnown RBP3.4□□□□□ -1.87
PTCD3-213ENST00000480102 EMP1P54849 157 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 CCL18P55774 89 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 TTC32Q5I0X7 151 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 SSX7Q7RTT5 188 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 Q86TA4 180 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 AKAP14Q86UN6 197 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 TMEM183AQ8IXX5 376 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 NRACQ8N912 160 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 NHLRC2Q8NBF2 726 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 Q8TAT8 98 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 SFT2D1Q8WV19 159 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 BIN3Q9NQY0 253 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 GSN-AS1Q9NRJ2 163 aa3.4□□□□□ -1.87
PTCD3-213ENST00000480102 MRPS16Q9Y3D3 137 aaKnown RBP3.4□□□□□ -1.87
PTCD3-213ENST00000480102 EPPK1P58107 5090 aaKnown RBP3.39□□□□□ -1.87
PTCD3-213ENST00000480102 HECTD4Q9Y4D8 3996 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 TRGV2A0A075B6R0 118 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 TRAV8-1A0A0A6YYK1 113 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 A8MWV9 139 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 C9JCJ5 164 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 TMEM250H0YL14 139 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 NXPH4O95158 308 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 GCGP01275 180 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 IFNA1P01562 189 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 OR5AL1P0C617 328 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 DEFB130BP0DP73 79 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 DEFB130AP0DP74 79 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 GATA1P15976 413 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-213ENST00000480102 CRYBA4P53673 196 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 TWIST1Q15672 202 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
PTCD3-213ENST00000480102 SOHLH1Q5JUK2 328 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 FAM162BQ5T6X4 162 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 Q6ZTI0 123 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms