RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CT83Q5H943 113 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 Q5VSD8 79 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 LCN15Q6UWW0 184 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 HIST3H2BBQ8N257 126 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 LYPD1Q8N2G4 141 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 C20orf144Q9BQM9 153 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 NPCDR1Q9BY65 106 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 TRGV2A0A075B6R0 118 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 FNDC10F2Z333 226 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 H3BNG1 76 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 H3BTX0 84 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 GATCO43716 136 aaKnown RBP7.11□□□□□ -1.27
SMURF1-204ENST00000480055 TRGC2P03986 189 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 FGF7P21781 194 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 S100A2P29034 98 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMURF1-204ENST00000480055 ERVFC1-1P60608 527 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 RPL23P62829 140 aaKnown RBP7.11□□□□□ -1.27
SMURF1-204ENST00000480055 TMEM241Q24JQ0 296 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 ACOT6Q3I5F7 207 aaPredicted RBP7.11□□□□□ -1.27
SMURF1-204ENST00000480055 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 IMMP2LQ96T52 175 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 SMIM7Q9BQ49 75 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 SLC50A1Q9BRV3 221 aa7.11□□□□□ -1.27
SMURF1-204ENST00000480055 TRAV12-3A0A0B4J271 114 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PRAC2D3DTV9 90 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PPP1R2P9O14990 202 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 SIVA1O15304 175 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PDE6DO43924 150 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 TRGC1P0CF51 173 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 LEPP41159 167 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 FGF8P55075 233 aaPredicted RBP7.1□□□□□ -1.27
SMURF1-204ENST00000480055 NDUFA6P56556 154 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PLP1P60201 277 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PYY3Q5JQD4 70 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 FFAR4Q5NUL3 377 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PATE2Q6UY27 113 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 LINC00305Q7Z4B0 112 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 BPIFA4PQ86YQ2 179 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 LINC00612Q8N6U2 182 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 OR10G9Q8NGN4 311 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 OR10G7Q8NGN6 311 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 FRZBQ92765 325 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 PARLQ9H300 379 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 NPVFQ9HCQ7 196 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 ZNF331Q9NQX6 463 aaPredicted RBP7.1□□□□□ -1.27
SMURF1-204ENST00000480055 KCNIP2Q9NS61 270 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 ARL2-SNX15V9GYD0 113 aa7.1□□□□□ -1.27
SMURF1-204ENST00000480055 F6UZH7 168 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 COX7A2P2O60397 106 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 CDC34P49427 236 aaPredicted RBP7.09□□□□□ -1.27
SMURF1-204ENST00000480055 CEBPGP53567 150 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 XGP55808 180 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 Q6ZTI0 123 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 TMEM183AQ8IXX5 376 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 RAB24Q969Q5 203 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 URGCP-MRPS24S4R325 110 aa7.09□□□□□ -1.27
SMURF1-204ENST00000480055 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
SMURF1-204ENST00000480055 A0A096LPF7 62 aa7.08□□□□□ -1.28
SMURF1-204ENST00000480055 TRGV1A0A0A0MS02 117 aa7.08□□□□□ -1.28
SMURF1-204ENST00000480055 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
SMURF1-204ENST00000480055 C18orf15Q96N68 181 aa7.08□□□□□ -1.28
SMURF1-204ENST00000480055 C8orf49Q96NF6 230 aa7.08□□□□□ -1.28
SMURF1-204ENST00000480055 PXMP4Q9Y6I8 212 aa7.08□□□□□ -1.28
SMURF1-204ENST00000480055 TRAV9-1A0A075B6T8 112 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 SLC17A3O00476 420 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 MRPS12O15235 138 aaKnown RBP7.07□□□□□ -1.28
SMURF1-204ENST00000480055 NXPH4O95158 308 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 STAG3L2P0CL84 134 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 STAG3L3P0CL85 134 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 CT45A10P0DMU9 189 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 DAZ2Q13117 558 aaKnown RBP7.07□□□□□ -1.28
SMURF1-204ENST00000480055 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 C10orf113Q5VZT2 155 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 FUT9Q9Y231 359 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 TNFRSF18Q9Y5U5 241 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 ICOSQ9Y6W8 199 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 LY96Q9Y6Y9 160 aa7.07□□□□□ -1.28
SMURF1-204ENST00000480055 TRAV9-2A0A087WT02 112 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 IGHV3-53P01767 116 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 SMR3BP02814 79 aaPredicted RBP7.06□□□□□ -1.28
SMURF1-204ENST00000480055 JOSD1Q15040 202 aaPredicted RBP7.06□□□□□ -1.28
SMURF1-204ENST00000480055 ADIRFQ15847 76 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 OR10D4PQ8NGN7 298 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 C11orf52Q96A22 123 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 PFDN5Q99471 154 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 HIST1H2BLQ99880 126 aa7.06□□□□□ -1.28
SMURF1-204ENST00000480055 C9JCJ5 164 aa7.05□□□□□ -1.28
SMURF1-204ENST00000480055 PAGE4O60829 102 aa7.05□□□□□ -1.28
SMURF1-204ENST00000480055 CXorf1O96002 111 aa7.05□□□□□ -1.28
SMURF1-204ENST00000480055 SLC25A5P05141 298 aaKnown RBP7.05□□□□□ -1.28
SMURF1-204ENST00000480055 DNAH10OSP0CZ25 163 aa7.05□□□□□ -1.28
SMURF1-204ENST00000480055 RNASE4P34096 147 aaKnown RBP7.05□□□□□ -1.28
SMURF1-204ENST00000480055 RPL29P47914 159 aaKnown RBP7.05□□□□□ -1.28
SMURF1-204ENST00000480055 RAB31Q13636 194 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms