RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
CLDN18-203ENST00000479660 CRXO43186 299 aaPredicted RBP10.63□□□□□ -0.71
CLDN18-203ENST00000479660 SMIM6P0DI80 62 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 EVI2AP22794 236 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 CITED1Q99966 193 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 SAMD10Q9BYL1 202 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 IGHV1OR15-1A0A075B7D0 117 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 M0R381 172 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 RAB4AP20338 218 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 DMRTA1Q5VZB9 504 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 STHQ8IWL8 128 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
CLDN18-203ENST00000479660 CKS2P33552 79 aa10.62□□□□□ -0.71
CLDN18-203ENST00000479660 CMC4P56277 68 aaPredicted RBP10.62□□□□□ -0.71
CLDN18-203ENST00000479660 NIT1Q86X76 327 aa10.62□□□□□ -0.71
CLDN18-203ENST00000479660 U3KQK5 164 aa10.62□□□□□ -0.71
CLDN18-203ENST00000479660 PYY3Q5JQD4 70 aa10.62□□□□□ -0.71
CLDN18-203ENST00000479660 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
CLDN18-203ENST00000479660 Q8N1Y9 231 aa10.62□□□□□ -0.71
CLDN18-203ENST00000479660 HSBP1O75506 76 aa10.61□□□□□ -0.71
CLDN18-203ENST00000479660 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
CLDN18-203ENST00000479660 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
CLDN18-203ENST00000479660 AMTP48728 403 aa10.61□□□□□ -0.71
CLDN18-203ENST00000479660 RBMY1FQ15415 496 aaKnown RBP10.61□□□□□ -0.71
CLDN18-203ENST00000479660 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
CLDN18-203ENST00000479660 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
CLDN18-203ENST00000479660 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 BTF3P20290 206 aaKnown RBP10.6□□□□□ -0.71
CLDN18-203ENST00000479660 PMCHP20382 165 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 BEAN1Q3B7T3 259 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 URB1-AS1Q96HZ7 61 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 LINC00614P0C842 121 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 MDFICQ9P1T7 246 aa10.6□□□□□ -0.71
CLDN18-203ENST00000479660 NCR2O95944 276 aa10.59□□□□□ -0.71
CLDN18-203ENST00000479660 PPBPP02775 128 aa10.59□□□□□ -0.71
CLDN18-203ENST00000479660 FAM110AQ9BQ89 295 aa10.59□□□□□ -0.71
CLDN18-203ENST00000479660 MUC4Q99102 2169 aa10.59□□□□□ -0.71
CLDN18-203ENST00000479660 CBY3A6NI87 242 aa10.58□□□□□ -0.72
CLDN18-203ENST00000479660 HTN1P15515 57 aa10.58□□□□□ -0.72
CLDN18-203ENST00000479660 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
CLDN18-203ENST00000479660 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
CLDN18-203ENST00000479660 ATRQ13535 2644 aa10.58□□□□□ -0.72
CLDN18-203ENST00000479660 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
CLDN18-203ENST00000479660 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
CLDN18-203ENST00000479660 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 LINC00587B1AMM8 73 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 NXPH4O95158 308 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 NPYP01303 97 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 INSP01308 110 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 INSL3P51460 131 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 NUTF2P61970 127 aaKnown RBP10.57□□□□□ -0.72
CLDN18-203ENST00000479660 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 C19orf73Q9NVV2 129 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 TEP1Q99973 2627 aaKnown RBP10.57□□□□□ -0.72
CLDN18-203ENST00000479660 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
CLDN18-203ENST00000479660 Q6ZWC4 215 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 SPATA3Q8NHX4 192 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 LINC01587Q99440 93 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
CLDN18-203ENST00000479660 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
CLDN18-203ENST00000479660 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
CLDN18-203ENST00000479660 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
CLDN18-203ENST00000479660 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
CLDN18-203ENST00000479660 LAMTOR2Q9Y2Q5 125 aa10.56□□□□□ -0.72
CLDN18-203ENST00000479660 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
CLDN18-203ENST00000479660 TRAV26-2A0A0B4J265 109 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
CLDN18-203ENST00000479660 KRTAP24-1Q3LI83 254 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 AP5S1Q9NUS5 200 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 TNFRSF6BO95407 300 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 PRM2P04554 102 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
CLDN18-203ENST00000479660 TRRAPQ9Y4A5 3859 aa10.54□□□□□ -0.72
CLDN18-203ENST00000479660 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
CLDN18-203ENST00000479660 CDPF1Q6NVV7 123 aa10.54□□□□□ -0.72
CLDN18-203ENST00000479660 SYT8Q8NBV8 401 aa10.54□□□□□ -0.72
CLDN18-203ENST00000479660 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
CLDN18-203ENST00000479660 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
CLDN18-203ENST00000479660 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
CLDN18-203ENST00000479660 MGPP08493 103 aa10.53□□□□□ -0.72
CLDN18-203ENST00000479660 TMEM208Q9BTX3 173 aa10.53□□□□□ -0.72
CLDN18-203ENST00000479660 JPT2Q9H910 190 aa10.53□□□□□ -0.72
CLDN18-203ENST00000479660 SCGB1D1O95968 90 aa10.52□□□□□ -0.73
CLDN18-203ENST00000479660 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
CLDN18-203ENST00000479660 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
CLDN18-203ENST00000479660 NRACQ8N912 160 aa10.52□□□□□ -0.73
CLDN18-203ENST00000479660 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.73
CLDN18-203ENST00000479660 KIF25-AS1Q9Y6Z4 181 aa10.52□□□□□ -0.73
CLDN18-203ENST00000479660 VWFP04275 2813 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms