RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 COL5A1P20908 1838 aaPredicted RBP11.17□□□□□ -0.62
COL20A1-206ENST00000479501 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 SH2D6Q7Z4S9 175 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 ZNF625Q96I27 306 aaPredicted RBP11.17□□□□□ -0.62
COL20A1-206ENST00000479501 TRGV4A0A0C4DH28 118 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 Q96MF0 132 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 SMIM2Q9BVW6 85 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 DSCAMO60469 2012 aa11.17□□□□□ -0.62
COL20A1-206ENST00000479501 MALP21145 153 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 BUB3O43684 328 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 IFITM1P13164 125 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 SPTBN4Q9H254 2564 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 IGHV4-59P01825 116 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 FRMD6-AS1P0C7T7 363 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 TRAV13-1A0A0B4J241 112 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 BLCAPP62952 87 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 RPL36AP83881 106 aaKnown RBP11.16□□□□□ -0.62
COL20A1-206ENST00000479501 RPL36ALQ969Q0 106 aaKnown RBP11.16□□□□□ -0.62
COL20A1-206ENST00000479501 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
COL20A1-206ENST00000479501 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.62
COL20A1-206ENST00000479501 WI2-2373I1.2A0A1W2PRP0 233 aa11.15□□□□□ -0.62
COL20A1-206ENST00000479501 CMC4P56277 68 aaPredicted RBP11.15□□□□□ -0.62
COL20A1-206ENST00000479501 TCTEX1D4Q5JR98 221 aa11.15□□□□□ -0.62
COL20A1-206ENST00000479501 C10orf105Q8TEF2 133 aa11.15□□□□□ -0.62
COL20A1-206ENST00000479501 ATG2AQ2TAZ0 1938 aa11.15□□□□□ -0.62
COL20A1-206ENST00000479501 SIRPDQ9H106 197 aa11.15□□□□□ -0.62
COL20A1-206ENST00000479501 PRRC2CQ9Y520 2896 aaKnown RBP11.15□□□□□ -0.62
COL20A1-206ENST00000479501 GAGE12JA6NER3 117 aa11.15□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE7O76087 117 aa11.15□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE12FP0CL80 117 aa11.15□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE12GP0CL81 117 aa11.15□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE12IP0CL82 117 aa11.15□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE4Q13068 117 aa11.15□□□□□ -0.63
COL20A1-206ENST00000479501 TRBV25-1A0A075B6N4 114 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 LEPROTO15243 131 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 JPT2Q9H910 190 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 TAX1BP3O14907 124 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 S100A7L2Q5SY68 101 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
COL20A1-206ENST00000479501 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 UBE2E2Q96LR5 201 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 ELANEP08246 267 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 EXPH5Q8NEV8 1989 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 TRGV1A0A0A0MS02 117 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 F6UB75 175 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 C5orf56Q8N8D9 126 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 GTSF1Q8WW33 167 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
COL20A1-206ENST00000479501 B5MCH6 92 aa11.13□□□□□ -0.63
COL20A1-206ENST00000479501 INSP01308 110 aa11.13□□□□□ -0.63
COL20A1-206ENST00000479501 FOXE3Q13461 319 aa11.13□□□□□ -0.63
COL20A1-206ENST00000479501 A0A087WX48 190 aa11.13□□□□□ -0.63
COL20A1-206ENST00000479501 TRPT1Q86TN4 253 aaKnown RBP11.13□□□□□ -0.63
COL20A1-206ENST00000479501 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
COL20A1-206ENST00000479501 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 INAFM2P0DMQ5 153 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
COL20A1-206ENST00000479501 CITED1Q99966 193 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 CHD8Q9HCK8 2581 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 LINC01619G3V211 115 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
COL20A1-206ENST00000479501 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 IGHV1OR15-1A0A075B7D0 117 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 FSTL3O95633 263 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 CFHR4Q92496 578 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
COL20A1-206ENST00000479501 J3QQQ9 107 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 HTN3P15516 51 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 IGLL5B9A064 214 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE5Q13069 117 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 GAGE6Q13070 117 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
COL20A1-206ENST00000479501 KNCNA6PVL3 124 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 LMO4P61968 165 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 ODF3BA8MYP8 253 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 DNAJC30Q96LL9 226 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 IGLV2-8P01709 118 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 WFDC2Q14508 124 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 IGHV3-53P01767 116 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 FOXI2Q6ZQN5 318 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 XCL2Q9UBD3 114 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 C5orf42Q9H799 3197 aa11.1□□□□□ -0.63
COL20A1-206ENST00000479501 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
COL20A1-206ENST00000479501 NRGNQ92686 78 aa11.09□□□□□ -0.63
COL20A1-206ENST00000479501 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
COL20A1-206ENST00000479501 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms