RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 NHLRC2Q8NBF2 726 aa9.61□□□□□ -0.87
C9orf85-205ENST00000479413 HSD17B11Q8NBQ5 300 aa9.61□□□□□ -0.87
C9orf85-205ENST00000479413 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
C9orf85-205ENST00000479413 WDR61Q9GZS3 305 aaKnown RBP9.61□□□□□ -0.87
C9orf85-205ENST00000479413 TMA7Q9Y2S6 64 aaKnown RBP9.61□□□□□ -0.87
C9orf85-205ENST00000479413 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 M0R2P5 195 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 Q6ZSN1 163 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
C9orf85-205ENST00000479413 TIRAPP58753 221 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 TAS2R45P59539 299 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 SRSF3P84103 164 aaKnown RBP9.59□□□□□ -0.87
C9orf85-205ENST00000479413 KHDC3LQ587J8 217 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 AKR1C8PQ5T2L2 129 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 ATRAIDQ6UW56 229 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 SCGB1C1Q8TD33 95 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 SH3BGRL3Q9H299 93 aa9.59□□□□□ -0.87
C9orf85-205ENST00000479413 FAT1Q14517 4588 aa9.58□□□□□ -0.88
C9orf85-205ENST00000479413 FLG2Q5D862 2391 aaPredicted RBP9.58□□□□□ -0.88
C9orf85-205ENST00000479413 TRAV8-6A0A0B4J262 113 aa9.58□□□□□ -0.88
C9orf85-205ENST00000479413 LOC105371267A0A1B0GV96 52 aa9.58□□□□□ -0.88
C9orf85-205ENST00000479413 NDUFS6O75380 124 aaKnown RBP9.58□□□□□ -0.88
C9orf85-205ENST00000479413 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
C9orf85-205ENST00000479413 CLRN3Q8NCR9 226 aa9.58□□□□□ -0.88
C9orf85-205ENST00000479413 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 IGHV3-16A0A0C4DH30 117 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 PFN1P07737 140 aaKnown RBP9.57□□□□□ -0.88
C9orf85-205ENST00000479413 HAMPP81172 84 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 FFAR4Q5NUL3 377 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 FAM213BQ8TBF2 198 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 MBD3L1Q8WWY6 194 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 SDF2L1Q9HCN8 221 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 OTORQ9NRC9 128 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 RPH3ALQ9UNE2 315 aa9.57□□□□□ -0.88
C9orf85-205ENST00000479413 SRRM2Q9UQ35 2752 aaKnown RBP9.57□□□□□ -0.88
C9orf85-205ENST00000479413 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 GNRH2O43555 120 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
C9orf85-205ENST00000479413 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 Q8N814 137 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 KCNS1Q96KK3 526 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 Q9HAA7 133 aa9.56□□□□□ -0.88
C9orf85-205ENST00000479413 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
C9orf85-205ENST00000479413 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
C9orf85-205ENST00000479413 MBP02144 154 aa9.55□□□□□ -0.88
C9orf85-205ENST00000479413 TYMSP04818 313 aa9.55□□□□□ -0.88
C9orf85-205ENST00000479413 ZNF506Q5JVG8 444 aa9.55□□□□□ -0.88
C9orf85-205ENST00000479413 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.55□□□□□ -0.88
C9orf85-205ENST00000479413 PRADC1Q9BSG0 188 aa9.55□□□□□ -0.88
C9orf85-205ENST00000479413 EIF5A2Q9GZV4 153 aaKnown RBP9.55□□□□□ -0.88
C9orf85-205ENST00000479413 PGPA6NDG6 321 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 C9JQL5 133 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 F6UZH7 168 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 J3QL48 77 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
C9orf85-205ENST00000479413 FHITP49789 147 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
C9orf85-205ENST00000479413 CIDEAO60543 219 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 RHEBQ15382 184 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 RHOHQ15669 191 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 ZNF876PQ49A33 203 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 NDFIP1Q9BT67 221 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 SMCO4Q9NRQ5 59 aa9.53□□□□□ -0.88
C9orf85-205ENST00000479413 MYCBP2O75592 4640 aa9.52□□□□□ -0.88
C9orf85-205ENST00000479413 TRBV6-4A0A1B0GX49 114 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 A0A1W2PPV4 95 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 IGHV3-30P01768 117 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 IGHV3-33P01772 117 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 IGHV3-30-3P0DP02 117 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 IGHV3-30-5P0DP03 117 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 FLI1Q01543 452 aaPredicted RBP9.52□□□□□ -0.89
C9orf85-205ENST00000479413 LAGE3Q14657 143 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 LELP1Q5T871 98 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 TM2D2Q9BX73 214 aa9.52□□□□□ -0.89
C9orf85-205ENST00000479413 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
C9orf85-205ENST00000479413 ACOT6Q3I5F7 207 aaPredicted RBP9.51□□□□□ -0.89
C9orf85-205ENST00000479413 CFAP126Q5VTH2 177 aa9.51□□□□□ -0.89
C9orf85-205ENST00000479413 C15orf54Q8N8G6 183 aa9.51□□□□□ -0.89
C9orf85-205ENST00000479413 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
C9orf85-205ENST00000479413 EIF3GO75821 320 aaKnown RBP eCLIP9.5□□□□□ -0.89
C9orf85-205ENST00000479413 IFNA1P01562 189 aa9.5□□□□□ -0.89
C9orf85-205ENST00000479413 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
C9orf85-205ENST00000479413 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
C9orf85-205ENST00000479413 TVP23CQ96ET8 276 aa9.5□□□□□ -0.89
C9orf85-205ENST00000479413 GTSF1LQ9H1H1 148 aa9.5□□□□□ -0.89
C9orf85-205ENST00000479413 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
C9orf85-205ENST00000479413 IGHV3-73A0A0B4J1V6 119 aa9.49□□□□□ -0.89
C9orf85-205ENST00000479413 SERTM2A0A1B0GWG4 89 aa9.49□□□□□ -0.89
C9orf85-205ENST00000479413 RS1O15537 224 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms