RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 LINC00311Q8N616 119 aa16.18■□□□□ 0.18
SDF4-206ENST00000478938 C9orf106Q8NAJ2 232 aa16.18■□□□□ 0.18
SDF4-206ENST00000478938 DMXL2Q8TDJ6 3036 aa16.18■□□□□ 0.18
SDF4-206ENST00000478938 TSHBP01222 138 aa16.18■□□□□ 0.18
SDF4-206ENST00000478938 MDS2Q8NDY4 140 aa16.18■□□□□ 0.18
SDF4-206ENST00000478938 J3QQQ9 107 aa16.16■□□□□ 0.18
SDF4-206ENST00000478938 SLC50A1Q9BRV3 221 aa16.16■□□□□ 0.18
SDF4-206ENST00000478938 CSMD1Q96PZ7 3565 aa16.16■□□□□ 0.18
SDF4-206ENST00000478938 RNF223E7ERA6 249 aa16.16■□□□□ 0.18
SDF4-206ENST00000478938 WIPF1O43516 503 aa16.16■□□□□ 0.18
SDF4-206ENST00000478938 TEX36Q5VZQ5 186 aa16.16■□□□□ 0.18
SDF4-206ENST00000478938 FAM240AA0A1B0GVK7 77 aa16.15■□□□□ 0.18
SDF4-206ENST00000478938 IGHV3-23P01764 117 aa16.15■□□□□ 0.18
SDF4-206ENST00000478938 CCL8P80075 99 aa16.15■□□□□ 0.18
SDF4-206ENST00000478938 LGALS3P17931 250 aaKnown RBP16.15■□□□□ 0.18
SDF4-206ENST00000478938 LINC00527Q9UJ94 153 aa16.15■□□□□ 0.18
SDF4-206ENST00000478938 SLC25A15Q9Y619 301 aa16.15■□□□□ 0.18
SDF4-206ENST00000478938 UQCRQO14949 82 aa16.14■□□□□ 0.17
SDF4-206ENST00000478938 DLX6P56179 175 aa16.14■□□□□ 0.17
SDF4-206ENST00000478938 MSRB2Q9Y3D2 182 aa16.14■□□□□ 0.17
SDF4-206ENST00000478938 PRSS33Q8NF86 280 aa16.13■□□□□ 0.17
SDF4-206ENST00000478938 ZNRF2Q8NHG8 242 aa16.13■□□□□ 0.17
SDF4-206ENST00000478938 LINC00526Q96FQ7 95 aa16.13■□□□□ 0.17
SDF4-206ENST00000478938 CD59P13987 128 aa16.13■□□□□ 0.17
SDF4-206ENST00000478938 IGLV3-9A0A075B6K5 115 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 LYPD2Q6UXB3 125 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 TMEM105Q8N8V8 129 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 METTL26Q96S19 204 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 ROS1P08922 2347 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 MGAQ8IWI9 3026 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 A0A1B0GX51 115 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 M0R381 172 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 CLEC2BQ92478 149 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 TP53TG1Q9Y2A0 90 aa16.12■□□□□ 0.17
SDF4-206ENST00000478938 TRBV30A0A0K0K1B3 111 aa16.11■□□□□ 0.17
SDF4-206ENST00000478938 C8orf31Q8N9H6 132 aa16.11■□□□□ 0.17
SDF4-206ENST00000478938 IGHV3-64A0A075B6Q5 118 aa16.11■□□□□ 0.17
SDF4-206ENST00000478938 IGHV3-35A0A0C4DH35 117 aa16.11■□□□□ 0.17
SDF4-206ENST00000478938 MGPP08493 103 aa16.11■□□□□ 0.17
SDF4-206ENST00000478938 IGHV4-4A0A075B6R2 117 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 CDX4O14627 284 aaPredicted RBP16.1■□□□□ 0.17
SDF4-206ENST00000478938 PAPPA-AS1Q5QFB9 102 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 AGPAT4-IT1Q9H0P7 198 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 TACC2O95359 2948 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 IGHV1-3A0A0C4DH29 117 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 ADIPOQQ15848 244 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 CACNA1GO43497 2377 aa16.1■□□□□ 0.17
SDF4-206ENST00000478938 LOC400499M0QZD8 3231 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 H3BT86 120 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 RPL39P62891 51 aaKnown RBP16.09■□□□□ 0.17
SDF4-206ENST00000478938 EEF1AKMT3Q96AZ1 226 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 F8W735 103 aaPredicted RBP16.09■□□□□ 0.17
SDF4-206ENST00000478938 ZNF883P0CG24 379 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 IGHV1-8P0DP01 117 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 OR13C6PQ8NH95 151 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 SMCR5Q8TEV8 140 aa16.09■□□□□ 0.17
SDF4-206ENST00000478938 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.08■□□□□ 0.16
SDF4-206ENST00000478938 A0A0G2JNJ9 132 aa16.08■□□□□ 0.16
SDF4-206ENST00000478938 C17orf100A8MU93 164 aa16.08■□□□□ 0.16
SDF4-206ENST00000478938 UBE2E1P51965 193 aa16.08■□□□□ 0.16
SDF4-206ENST00000478938 DEFB121Q5J5C9 76 aa16.08■□□□□ 0.16
SDF4-206ENST00000478938 Q9UFV3 132 aa16.08■□□□□ 0.16
SDF4-206ENST00000478938 ICOSQ9Y6W8 199 aa16.08■□□□□ 0.16
SDF4-206ENST00000478938 TMEM223A0PJW6 202 aa16.07■□□□□ 0.16
SDF4-206ENST00000478938 IGFBPL1Q8WX77 278 aa16.07■□□□□ 0.16
SDF4-206ENST00000478938 IGIPA6NJ69 53 aa16.07■□□□□ 0.16
SDF4-206ENST00000478938 Q6ZSV7 163 aa16.07■□□□□ 0.16
SDF4-206ENST00000478938 MFAP4P55083 255 aa16.06■□□□□ 0.16
SDF4-206ENST00000478938 LOXP28300 417 aaPredicted RBP16.06■□□□□ 0.16
SDF4-206ENST00000478938 GAGE2AQ6NT46 116 aa16.06■□□□□ 0.16
SDF4-206ENST00000478938 IMUPQ9GZP8 106 aa16.06■□□□□ 0.16
SDF4-206ENST00000478938 TRAV41A0A0B4J266 112 aa16.05■□□□□ 0.16
SDF4-206ENST00000478938 TMEM219Q86XT9 240 aa16.05■□□□□ 0.16
SDF4-206ENST00000478938 ARHGAP32A7KAX9 2087 aa16.05■□□□□ 0.16
SDF4-206ENST00000478938 PATE3B3GLJ2 98 aa16.05■□□□□ 0.16
SDF4-206ENST00000478938 B9A039 149 aa16.05■□□□□ 0.16
SDF4-206ENST00000478938 NDUFB3O43676 98 aa16.05■□□□□ 0.16
SDF4-206ENST00000478938 TRAV17A0A0B4J275 112 aa16.04■□□□□ 0.16
SDF4-206ENST00000478938 CYSTM1Q9H1C7 97 aa16.04■□□□□ 0.16
SDF4-206ENST00000478938 IGHV3-66A0A0C4DH42 116 aa16.04■□□□□ 0.16
SDF4-206ENST00000478938 DPH3P1Q9H4G8 78 aa16.03■□□□□ 0.16
SDF4-206ENST00000478938 FANCD2OSQ96PS1 177 aa16.03■□□□□ 0.16
SDF4-206ENST00000478938 ZNF580Q9UK33 172 aa16.03■□□□□ 0.16
SDF4-206ENST00000478938 ZNF256Q9Y2P7 627 aaPredicted RBP16.03■□□□□ 0.16
SDF4-206ENST00000478938 WNK2Q9Y3S1 2297 aa16.03■□□□□ 0.16
SDF4-206ENST00000478938 PRR9Q5T870 116 aa16.02■□□□□ 0.16
SDF4-206ENST00000478938 ATP1A1-AS1Q5TC04 95 aa16.02■□□□□ 0.16
SDF4-206ENST00000478938 SIT1Q9Y3P8 196 aa16.02■□□□□ 0.15
SDF4-206ENST00000478938 ADARB2-AS1A8MUL3 147 aa16.01■□□□□ 0.15
SDF4-206ENST00000478938 COX7CP15954 63 aa16.01■□□□□ 0.15
SDF4-206ENST00000478938 TRAV8-3A0A0A6YYJ7 113 aa16.01■□□□□ 0.15
SDF4-206ENST00000478938 hADV29S1A0JD25 119 aa16.01■□□□□ 0.15
SDF4-206ENST00000478938 ZNF876PQ49A33 203 aa16.01■□□□□ 0.15
SDF4-206ENST00000478938 KIR2DL5BQ8NHK3 375 aa16.01■□□□□ 0.15
SDF4-206ENST00000478938 TPRP12270 2363 aaKnown RBP16.01■□□□□ 0.15
SDF4-206ENST00000478938 IGHV3OR16-13A0A075B7E8 117 aa16■□□□□ 0.15
SDF4-206ENST00000478938 IGHV3-74A0A0B4J1X5 117 aa16■□□□□ 0.15
SDF4-206ENST00000478938 LEPROTO15243 131 aa16■□□□□ 0.15
SDF4-206ENST00000478938 COX7A1P24310 79 aa16■□□□□ 0.15
SDF4-206ENST00000478938 GPHB5Q86YW7 130 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms