RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CSTL1Q9H114 145 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 PRR9Q5T870 116 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
CMC1-209ENST00000477739 IGKV3OR2-268A0A0C4DH90 116 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 MINOS1Q5TGZ0 78 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 C10orf99Q6UWK7 81 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 Q6ZS46 218 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
CMC1-209ENST00000477739 MINOS1-NBL1R4GNA1 71 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 K7EP34 96 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 CIDEAO60543 219 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 ODF1Q14990 250 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 SAMD13Q5VXD3 122 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 Q8N9W7 124 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 SPOCK3Q9BQ16 436 aa7.5□□□□□ -1.21
CMC1-209ENST00000477739 HECTD1Q9ULT8 2610 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 LINC01549A6NIU2 74 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 PRB1P04280 392 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 LGALS9BQ3B8N2 356 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 PSMG4Q5JS54 123 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 LGALS9CQ6DKI2 356 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 VPS13CQ709C8 3753 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 CFAP46Q8IYW2 2715 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 BUB3O43684 328 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 PAX2Q02962 417 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 LYPD1Q8N2G4 141 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 NXT2Q9NPJ8 142 aaKnown RBP7.49□□□□□ -1.21
CMC1-209ENST00000477739 TRAV2A0A0B4J234 112 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 A0A1B0GV72 72 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 ODF3BA8MYP8 253 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 F8W735 103 aaPredicted RBP7.49□□□□□ -1.21
CMC1-209ENST00000477739 ASIPP42127 132 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 FAM159AQ6UWV7 190 aa7.49□□□□□ -1.21
CMC1-209ENST00000477739 TRAV41A0A0B4J266 112 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 OOSP1A8MZH6 123 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 H3BRM9 83 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 RPS20P60866 119 aaKnown RBP7.48□□□□□ -1.21
CMC1-209ENST00000477739 C11orf71Q6IPW1 123 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 C2orf66Q6UXQ4 117 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 BOD1L2Q8IYS8 172 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 OR4X2Q8NGF9 303 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 BSNQ9UPA5 3926 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 PRSS29PA6NIE9 313 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 DUSP14O95147 198 aaKnown RBP7.48□□□□□ -1.21
CMC1-209ENST00000477739 ATP5J2P56134 94 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 SPINK13Q1W4C9 94 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 DPF1Q92782 380 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 CCDC140Q96MF4 163 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 WI2-2373I1.2A0A1W2PRP0 233 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 CRXO43186 299 aaPredicted RBP7.48□□□□□ -1.21
CMC1-209ENST00000477739 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 IGHV4-38-2P0DP08 117 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 AZU1P20160 251 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 SRSF1Q07955 248 aaKnown RBP eCLIP7.48□□□□□ -1.21
CMC1-209ENST00000477739 ZNF625Q96I27 306 aaPredicted RBP7.48□□□□□ -1.21
CMC1-209ENST00000477739 PRADC1Q9BSG0 188 aa7.48□□□□□ -1.21
CMC1-209ENST00000477739 UBE2E1P51965 193 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 OR9G4Q8NGQ1 327 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 C20orf173Q96LM9 149 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 TP53TG1Q9Y2A0 90 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 PDE6HQ13956 83 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 RHPN1-AS1Q9BWJ2 59 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 NPFFO15130 113 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 ATP5LO75964 103 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 NPFFR1Q9GZQ6 430 aa7.47□□□□□ -1.21
CMC1-209ENST00000477739 IGHV3-16A0A0C4DH30 117 aa7.46□□□□□ -1.21
CMC1-209ENST00000477739 IGHV3-38A0A0C4DH36 116 aa7.46□□□□□ -1.21
CMC1-209ENST00000477739 TMEM238C9JI98 176 aa7.46□□□□□ -1.21
CMC1-209ENST00000477739 DEFB136Q30KP8 78 aa7.46□□□□□ -1.21
CMC1-209ENST00000477739 A0A1B0GW15 77 aa7.46□□□□□ -1.22
CMC1-209ENST00000477739 SUMO2P61956 95 aaKnown RBP7.46□□□□□ -1.22
CMC1-209ENST00000477739 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
CMC1-209ENST00000477739 PLEKHB2Q96CS7 222 aa7.46□□□□□ -1.22
CMC1-209ENST00000477739 TEX15Q9BXT5 2789 aa7.46□□□□□ -1.22
CMC1-209ENST00000477739 A0A1W2PRX2 142 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 C19orf84I3L1E1 186 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 CEMP1Q6PRD7 247 aaPredicted RBP7.45□□□□□ -1.22
CMC1-209ENST00000477739 PHLDA1Q8WV24 401 aaPredicted RBP7.45□□□□□ -1.22
CMC1-209ENST00000477739 IGHG4P01861 327 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 SIRPDQ9H106 197 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 J3QR89 54 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 CEND1Q8N111 149 aa7.45□□□□□ -1.22
CMC1-209ENST00000477739 MRPS12O15235 138 aaKnown RBP7.44□□□□□ -1.22
CMC1-209ENST00000477739 HOXA3O43365 443 aaPredicted RBP7.44□□□□□ -1.22
CMC1-209ENST00000477739 FAM110DQ8TAY7 271 aaPredicted RBP7.44□□□□□ -1.22
CMC1-209ENST00000477739 SPXQ9BT56 116 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 PPBPP02775 128 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 CCL19Q99731 98 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 C20orf78Q9BR46 151 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 P0DMU3 169 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 FAM231AP0DMU4 169 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 FAM231CP0DMU5 169 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 CLEC2AQ6UVW9 174 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 Q8N8P6 123 aa7.44□□□□□ -1.22
CMC1-209ENST00000477739 SMIM2Q9BVW6 85 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms