RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 SLC25A29Q8N8R3 303 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 C9orf163Q8N9P6 203 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 RAB2BQ8WUD1 216 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 GTSF1Q8WW33 167 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 DEDD2Q8WXF8 326 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 SLC25A21Q9BQT8 299 aaPredicted RBP3.79□□□□□ -1.8
LINC00173-202ENST00000477702 MRPS26Q9BYN8 205 aaKnown RBP3.79□□□□□ -1.8
LINC00173-202ENST00000477702 ARL6Q9H0F7 186 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 IGHV3-73A0A0B4J1V6 119 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 M0R3E3 92 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 GOSR2O14653 212 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 RAB31Q13636 194 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 TMEM183BQ1AE95 376 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 PYDC2Q56P42 97 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 TMEM183AQ8IXX5 376 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 ZFAND2AQ8N6M9 145 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 C7orf33Q8WU49 177 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 FAM19A4Q96LR4 140 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 C2orf50Q96LR7 162 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 BCL7BQ9BQE9 202 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 AGPAT4-IT1Q9H0P7 198 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 PYGO1Q9Y3Y4 419 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 PXMP4Q9Y6I8 212 aa3.78□□□□□ -1.8
LINC00173-202ENST00000477702 A0A087X002 238 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 FBLL1A6NHQ2 334 aaKnown RBP3.77□□□□□ -1.81
LINC00173-202ENST00000477702 PRSS46E5RG02 174 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 HLA-DQA1P01909 254 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 OR10J4P0C629 311 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 TMBIM6P55061 237 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 UBE2MP61081 183 aaKnown RBP3.77□□□□□ -1.81
LINC00173-202ENST00000477702 CIRBPQ14011 172 aaKnown RBP3.77□□□□□ -1.81
LINC00173-202ENST00000477702 SPINK6Q6UWN8 80 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 BPIFA4PQ86YQ2 179 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 MCFD2Q8NI22 146 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 PRADC1Q9BSG0 188 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 SPXQ9BT56 116 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 NAA50Q9GZZ1 169 aaKnown RBP3.77□□□□□ -1.81
LINC00173-202ENST00000477702 ARV1Q9H2C2 271 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 MIXL1Q9H2W2 232 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 NPVFQ9HCQ7 196 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 PSENENQ9NZ42 101 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 CCDC59Q9P031 241 aaKnown RBP3.77□□□□□ -1.81
LINC00173-202ENST00000477702 VAX2Q9UIW0 290 aa3.77□□□□□ -1.81
LINC00173-202ENST00000477702 IGKV2-40A0A087WW87 121 aaPredicted RBP3.76□□□□□ -1.81
LINC00173-202ENST00000477702 C5orf51A6NDU8 294 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 CENPXA8MT69 81 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 H7C1H1 209 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 IGKV2D-40P01614 121 aaPredicted RBP3.76□□□□□ -1.81
LINC00173-202ENST00000477702 IGLC2P0DOY2 106 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 CRISP2P16562 243 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 POLR2GP62487 172 aaKnown RBP eCLIP3.76□□□□□ -1.81
LINC00173-202ENST00000477702 RHOHQ15669 191 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 LBHQ53QV2 105 aaPredicted RBP3.76□□□□□ -1.81
LINC00173-202ENST00000477702 SPANXN2Q5MJ10 180 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 Q6ZRG5 221 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 LINC00305Q7Z4B0 112 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 NIT1Q86X76 327 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 C12orf45Q8N5I9 185 aaPredicted RBP3.76□□□□□ -1.81
LINC00173-202ENST00000477702 LYPD6BQ8NI32 183 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 SPACA4Q8TDM5 124 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 SRRQ9GZT4 340 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 OR51M1Q9H341 326 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 URGCP-MRPS24S4R325 110 aa3.76□□□□□ -1.81
LINC00173-202ENST00000477702 NAP1L6A6NFF2 107 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 CCDC160A6NGH7 325 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 FNDC10F2Z333 226 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 H3BP45 60 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 L7N2F9 121 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 M0R2P5 195 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 TAAR5O14804 337 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 COX7A2P2O60397 106 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 ZNF253O75346 499 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 SFT2D2O95562 160 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 MT3P25713 68 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 PLP1P60201 277 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 RPL19P84098 196 aaKnown RBP3.75□□□□□ -1.81
LINC00173-202ENST00000477702 SPCS2Q15005 226 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 GUK1Q16774 197 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 CNPY1Q3B7I2 92 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 ATRAIDQ6UW56 229 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 ZNF546Q86UE3 836 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 Q8TAT8 98 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 SMIM8Q96KF7 97 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 GSKIPQ9P0R6 139 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 NAGKQ9UJ70 344 aa3.75□□□□□ -1.81
LINC00173-202ENST00000477702 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 TRBV6-4A0A1B0GX49 114 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 GNRH2O43555 120 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 SSSCA1O60232 199 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 NMBP08949 121 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 SEC11BP0C7V7 166 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 PVALBP20472 110 aaPredicted RBP3.74□□□□□ -1.81
LINC00173-202ENST00000477702 TAS2R30P59541 319 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 RRAS2P62070 204 aaPredicted RBP3.74□□□□□ -1.81
LINC00173-202ENST00000477702 SLC38A11Q08AI6 406 aa3.74□□□□□ -1.81
LINC00173-202ENST00000477702 SRSF9Q13242 221 aaKnown RBP eCLIP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms