RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 IGKV2-40A0A087WW87 121 aaPredicted RBP3□□□□□ -1.93
CKS1B-207ENST00000477676 FNDC10F2Z333 226 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 SSSCA1O60232 199 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 IGKV2D-40P01614 121 aaPredicted RBP3□□□□□ -1.93
CKS1B-207ENST00000477676 OR4E1P0C645 316 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 ANXA3P12429 323 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 CRISP2P16562 243 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 LEPP41159 167 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 RPL24P83731 157 aaKnown RBP3□□□□□ -1.93
CKS1B-207ENST00000477676 MRPL23Q16540 153 aaKnown RBP3□□□□□ -1.93
CKS1B-207ENST00000477676 MIC13Q5XKP0 118 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 SMIM15Q7Z3B0 74 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 NEGR1Q7Z3B1 354 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 BPIFA4PQ86YQ2 179 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 RAB2BQ8WUD1 216 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 SCGB3A2Q96PL1 93 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 SLIRPQ9GZT3 109 aaKnown RBP3□□□□□ -1.93
CKS1B-207ENST00000477676 GFRA4Q9GZZ7 299 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 C11orf1Q9H5F2 150 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 NPVFQ9HCQ7 196 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 VCX3AQ9NNX9 186 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 CCDC59Q9P031 241 aaKnown RBP3□□□□□ -1.93
CKS1B-207ENST00000477676 FLVCR2Q9UPI3 526 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 RNF24Q9Y225 148 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 PXMP4Q9Y6I8 212 aa3□□□□□ -1.93
CKS1B-207ENST00000477676 TRBV19A0A075B6N1 114 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV1OR15-1A0A075B7D0 117 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 C9orf170A2RU37 121 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 C7orf66A4D0T2 115 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 IBA57-AS1B1ANH7 110 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 GOSR2O14653 212 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 COX7A2P2O60397 106 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 MPDU1O75352 247 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 C1QBP02746 253 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 PYYP10082 97 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 EVI2AP22794 236 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 PPT1P50897 306 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 AP3S2P59780 193 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 GCSAMLQ5JQS6 135 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 IBA57Q5T440 356 aaKnown RBP2.99□□□□□ -1.93
CKS1B-207ENST00000477676 C10orf113Q5VZT2 155 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 SCXQ7RTU7 201 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 EXOC3-AS1Q8N2X6 119 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 OR10P1Q8NGE3 313 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 OR10G4Q8NGN3 311 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 DEFB104AQ8WTQ1 72 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 Q9HAA7 133 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 V9GYH0 126 aa2.99□□□□□ -1.93
CKS1B-207ENST00000477676 TRAV9-2A0A087WT02 112 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV3-16A0A0C4DH30 117 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV3-38A0A0C4DH36 116 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 FABP12A6NFH5 140 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 CCSO14618 274 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 LECT2O14960 151 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 ZNF253O75346 499 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 GPX1P07203 203 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 SRIP30626 198 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 S100A7P31151 101 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 CDC34P49427 236 aaPredicted RBP2.98□□□□□ -1.93
CKS1B-207ENST00000477676 UBE2MP61081 183 aaKnown RBP2.98□□□□□ -1.93
CKS1B-207ENST00000477676 LINC01556Q5JQF7 62 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 MUC21Q5SSG8 566 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 COX8CQ7Z4L0 72 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 ZNF546Q86UE3 836 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 OR2D3Q8NGH3 330 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 Q8TAT8 98 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 BLNKQ8WV28 456 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 RASL10AQ92737 203 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 MRPL53Q96EL3 112 aaKnown RBP2.98□□□□□ -1.93
CKS1B-207ENST00000477676 FAM167A-AS1Q96KT0 104 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 LINC00477Q96M19 166 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 ZNF492Q9P255 531 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 Q9UF83 564 aa2.98□□□□□ -1.93
CKS1B-207ENST00000477676 RSL24D1Q9UHA3 163 aaKnown RBP2.98□□□□□ -1.93
CKS1B-207ENST00000477676 TRGV4A0A0C4DH28 118 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 FAM24AA6NFZ4 105 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 H3BMQ9 156 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 K7EP13 123 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 GNRH2O43555 120 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 CST7O76096 145 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 OXTP01178 125 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV3-30P01768 117 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV3-33P01772 117 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 NMBP08949 121 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV3-30-3P0DP02 117 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 IGHV3-30-5P0DP03 117 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 HIST1H1EP10412 219 aaKnown RBP2.97□□□□□ -1.93
CKS1B-207ENST00000477676 GATA1P15976 413 aaPredicted RBP2.97□□□□□ -1.93
CKS1B-207ENST00000477676 BTCP35070 178 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 TAS2R30P59541 319 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 GUK1Q16774 197 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 TMEM183BQ1AE95 376 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 IAH1Q2TAA2 248 aaPredicted RBP2.97□□□□□ -1.93
CKS1B-207ENST00000477676 FAM159AQ6UWV7 190 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 DPPA3Q6W0C5 159 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 SH2D6Q7Z4S9 175 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 TMEM183AQ8IXX5 376 aa2.97□□□□□ -1.93
CKS1B-207ENST00000477676 C10orf126Q8N4M7 172 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms