RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 FAM19A4Q96LR4 140 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 ADGRG4Q8IZF6 3080 aa9.78□□□□□ -0.84
RTFDC1-207ENST00000477573 F8VRH5 84 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 H7C1H1 209 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 C17orf58Q2M2W7 97 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 LINC00574Q9H8X3 128 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 NBASA2RRP1 2371 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 PKDREJQ9NTG1 2253 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 DSCAML1Q8TD84 2053 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 ENSAO43768 121 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 C5orf38Q86SI9 138 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 TMEM14BQ9NUH8 114 aa9.77□□□□□ -0.85
RTFDC1-207ENST00000477573 RAI1Q7Z5J4 1906 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 FSTL3O95633 263 aa9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 HOXB4P17483 251 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 METTL26Q96S19 204 aa9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 CACNA1AO00555 2505 aa9.76□□□□□ -0.85
RTFDC1-207ENST00000477573 NDUFB3O43676 98 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 FCGR3BO75015 233 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 C2orf83Q53S99 150 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 NBEAQ8NFP9 2946 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 GRNP28799 593 aaKnown RBP9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 DSCR8Q96T75 97 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 S1PR3Q99500 378 aa9.75□□□□□ -0.85
RTFDC1-207ENST00000477573 NDUFC2-KCTD14E9PQ53 114 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 C6orf226Q5I0X4 101 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 ARFGEF3Q5TH69 2177 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 COL6A6A6NMZ7 2263 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 NDUFA3O95167 84 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 PLAUP00749 431 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 PSMB8P28062 276 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 ZNF134P52741 427 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 HERVK_113P61574 105 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 CD69Q07108 199 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 KAAG1Q9UBP8 84 aa9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 RPUSD1Q9UJJ7 312 aaKnown RBP9.74□□□□□ -0.85
RTFDC1-207ENST00000477573 TPRP12270 2363 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 TRAV3A0A0B4J244 114 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 A0A0B4J2C4 111 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 COX6B1P14854 86 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 RPL39P5Q59GN2 51 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 PATE2Q6UY27 113 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
RTFDC1-207ENST00000477573 NBR2O15453 112 aa9.72□□□□□ -0.85
RTFDC1-207ENST00000477573 PROP1O75360 226 aa9.72□□□□□ -0.85
RTFDC1-207ENST00000477573 LYZL1Q6UWQ5 148 aa9.72□□□□□ -0.85
RTFDC1-207ENST00000477573 LEAP2Q969E1 77 aa9.72□□□□□ -0.85
RTFDC1-207ENST00000477573 C20orf173Q96LM9 149 aa9.72□□□□□ -0.85
RTFDC1-207ENST00000477573 KALRNO60229 2985 aa9.72□□□□□ -0.85
RTFDC1-207ENST00000477573 A0A0J9YY99 117 aa9.71□□□□□ -0.85
RTFDC1-207ENST00000477573 IGLV2-11P01706 119 aa9.71□□□□□ -0.85
RTFDC1-207ENST00000477573 SAA2P0DJI9 122 aaPredicted RBP9.71□□□□□ -0.85
RTFDC1-207ENST00000477573 Q9H3A6 140 aa9.71□□□□□ -0.85
RTFDC1-207ENST00000477573 ITPR1Q14643 2758 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 TRBV30A0A0K0K1B3 111 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 ELANEP08246 267 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 LINC00205P59089 165 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 PRCDQ00LT1 54 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 CDSNQ15517 529 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 LINC00305Q7Z4B0 112 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 TMEM75Q8N9X5 138 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 UPK3BQ9BT76 320 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 SIRPDQ9H106 197 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
RTFDC1-207ENST00000477573 EPM2AB3EWF7 344 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 TMEM200BQ69YZ2 307 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 ABCA4P78363 2273 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 FAM236DA0A1B0GTK5 79 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 FAM236CP0DP71 79 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 LOXP28300 417 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 LYPD2Q6UXB3 125 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 VKORC1L1Q8N0U8 176 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 SERP2Q8N6R1 65 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 TP53TG1Q9Y2A0 90 aa9.7□□□□□ -0.86
RTFDC1-207ENST00000477573 PKD1L2Q7Z442 2459 aa9.69□□□□□ -0.86
RTFDC1-207ENST00000477573 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
RTFDC1-207ENST00000477573 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
RTFDC1-207ENST00000477573 SMG1Q96Q15 3661 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 IGLV2-18A0A075B6J9 118 aa9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 LAGE3Q14657 143 aa9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 HIVEP3Q5T1R4 2406 aa9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 H7C423 109 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms