RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 F8W036 122 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 GATCO43716 136 aaKnown RBP10.91□□□□□ -0.66
SEC13-215ENST00000477547 GAGE7O76087 117 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 DEFB130BP0DP73 79 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 DEFB130AP0DP74 79 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 DNLZQ5SXM8 178 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 IL36BQ9NZH7 164 aa10.91□□□□□ -0.66
SEC13-215ENST00000477547 M0R2P5 195 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 SPINK4O60575 86 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 GZMBP10144 247 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 PNRC1Q12796 327 aaPredicted RBP10.9□□□□□ -0.66
SEC13-215ENST00000477547 Q6ZTC4 211 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 C15orf54Q8N8G6 183 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
SEC13-215ENST00000477547 ARMS2P0C7Q2 107 aa10.89□□□□□ -0.67
SEC13-215ENST00000477547 MED14OSP0DP75 135 aa10.89□□□□□ -0.67
SEC13-215ENST00000477547 C12orf74Q32Q52 190 aa10.89□□□□□ -0.67
SEC13-215ENST00000477547 LGALS9BQ3B8N2 356 aa10.89□□□□□ -0.67
SEC13-215ENST00000477547 LINC00612Q8N6U2 182 aa10.89□□□□□ -0.67
SEC13-215ENST00000477547 SEC11CQ9BY50 192 aa10.89□□□□□ -0.67
SEC13-215ENST00000477547 TRGV2A0A075B6R0 118 aa10.88□□□□□ -0.67
SEC13-215ENST00000477547 CT83Q5H943 113 aa10.88□□□□□ -0.67
SEC13-215ENST00000477547 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
SEC13-215ENST00000477547 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
SEC13-215ENST00000477547 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
SEC13-215ENST00000477547 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
SEC13-215ENST00000477547 IGLC6P0CF74 106 aa10.87□□□□□ -0.67
SEC13-215ENST00000477547 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
SEC13-215ENST00000477547 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
SEC13-215ENST00000477547 SCRT2Q9NQ03 307 aa10.87□□□□□ -0.67
SEC13-215ENST00000477547 CSMD3Q7Z407 3707 aa10.87□□□□□ -0.67
SEC13-215ENST00000477547 M0R381 172 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 SNAI2O43623 268 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 HTN3P15516 51 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 ZFAND6Q6FIF0 208 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 ZFP82Q8N141 532 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 SYT8Q8NBV8 401 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 OR10AG1Q8NH19 301 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 V9GYV3 84 aa10.86□□□□□ -0.67
SEC13-215ENST00000477547 A8MWL6 223 aa10.85□□□□□ -0.67
SEC13-215ENST00000477547 ATP5G1P05496 136 aa10.85□□□□□ -0.67
SEC13-215ENST00000477547 CTRLP40313 264 aa10.85□□□□□ -0.67
SEC13-215ENST00000477547 RASL10AQ92737 203 aa10.85□□□□□ -0.67
SEC13-215ENST00000477547 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
SEC13-215ENST00000477547 TRAV10A0A0B4J240 114 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 MUC21A0A0G2JKD1 596 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 MUC21A0A140T8X8 626 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 A0A1W2PPQ1 181 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 NDUFA5Q16718 116 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 SPANXN1Q5VSR9 72 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 PHLDA1Q8WV24 401 aaPredicted RBP10.84□□□□□ -0.67
SEC13-215ENST00000477547 PTH2Q96A98 100 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 NXPH4O95158 308 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 IGHV3-53P01767 116 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 RNF212Q495C1 297 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 C10orf91Q5T1B1 145 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 SLC7A5P1Q8MH63 180 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
SEC13-215ENST00000477547 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
SEC13-215ENST00000477547 DEFB131BA0A096LNP1 70 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 NUPR2A6NF83 97 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 PPP1R2P9O14990 202 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 GFRA4Q9GZZ7 299 aa10.83□□□□□ -0.68
SEC13-215ENST00000477547 HIGD1CA8MV81 97 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 F2Z2F3 143 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 F5H768 121 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 SSTP61278 116 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 CACNG7P62955 275 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 OR4C5Q8NGB2 326 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 PGLYRP4Q96LB8 373 aa10.82□□□□□ -0.68
SEC13-215ENST00000477547 A8MWV9 139 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 CFAP126Q5VTH2 177 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 ZNF479Q96JC4 524 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 AP1S3Q96PC3 154 aa10.81□□□□□ -0.68
SEC13-215ENST00000477547 HERC2O95714 4834 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 FAM231BA6NCW3 169 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 RS1O15537 224 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 APOC3P02656 99 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 HOXA5P20719 270 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 CNFNQ9BYD5 112 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 JPT2Q9H910 190 aa10.8□□□□□ -0.68
SEC13-215ENST00000477547 PLECQ15149 4684 aaKnown RBP10.79□□□□□ -0.68
SEC13-215ENST00000477547 PCLOQ9Y6V0 5065 aa10.79□□□□□ -0.68
SEC13-215ENST00000477547 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms