RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 Q8N8P6 123 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 NRACQ8N912 160 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 TP73-AS1Q9UF72 201 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 GOLT1BQ9Y3E0 138 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 KLLNB2CW77 178 aa8.26□□□□□ -1.09
HLA-DMB-260ENST00000477537 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
HLA-DMB-260ENST00000477537 FCER1GP30273 86 aa8.26□□□□□ -1.09
HLA-DMB-260ENST00000477537 IGLV2-18A0A075B6J9 118 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 K7EQG2 157 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 TCAPO15273 167 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 SNRPD3P62318 126 aaKnown RBP8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 LGALS9CQ6DKI2 356 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 Q8N2B8 174 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 MRAP2Q96G30 205 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 FOXC2Q99958 501 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 SCRT2Q9NQ03 307 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 RNASE3P12724 160 aaKnown RBP8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 COL5A1-AS1Q5SY13 56 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 SLC25A34Q6PIV7 304 aa8.25□□□□□ -1.09
HLA-DMB-260ENST00000477537 MTORP42345 2549 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 TRAV12-3A0A0B4J271 114 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 SLURP1P55000 103 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 DEFB136Q30KP8 78 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 STPG4Q8N801 248 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 TMEM158Q8WZ71 300 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
HLA-DMB-260ENST00000477537 A0A0J9YX75 114 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 C7orf71A4D174 169 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 PRSS47A8MTI9 375 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 MGPP08493 103 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 FAM159AQ6UWV7 190 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 DEFB125Q8N687 156 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 MUC4Q99102 2169 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 CD5LO43866 347 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 LAGE3Q14657 143 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 TCTEX1D4Q5JR98 221 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 ODF3Q96PU9 254 aa8.23□□□□□ -1.09
HLA-DMB-260ENST00000477537 AGRNO00468 2067 aa8.22□□□□□ -1.09
HLA-DMB-260ENST00000477537 G0S2P27469 103 aa8.22□□□□□ -1.09
HLA-DMB-260ENST00000477537 ZNF124Q15973 351 aa8.22□□□□□ -1.09
HLA-DMB-260ENST00000477537 ADAMTSL5Q6ZMM2 481 aa8.22□□□□□ -1.09
HLA-DMB-260ENST00000477537 AP1S3Q96PC3 154 aa8.22□□□□□ -1.09
HLA-DMB-260ENST00000477537 TEP1Q99973 2627 aaKnown RBP8.22□□□□□ -1.09
HLA-DMB-260ENST00000477537 TRAV12-2A0A075B6T6 113 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 LINC01619G3V211 115 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 CD7P09564 240 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 RASL10AQ92737 203 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 SMIM2Q9BVW6 85 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 DKK2Q9UBU2 259 aa8.21□□□□□ -1.09
HLA-DMB-260ENST00000477537 F8P00451 2351 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 NXPH4O95158 308 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 SMIM17P0DL12 118 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 COX8AP10176 69 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 TMEM86BQ8N661 226 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 OR11H1Q8NG94 326 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 DPF1Q92782 380 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 DUX3Q96PT4 197 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 SMR3AQ99954 134 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 SORL1Q92673 2214 aa8.21□□□□□ -1.1
HLA-DMB-260ENST00000477537 DUSP14O95147 198 aaKnown RBP8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 PRSS1P07477 247 aa8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 SUMO2P61956 95 aaKnown RBP8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 SPINK13Q1W4C9 94 aa8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 FOXI2Q6ZQN5 318 aa8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 TEX29Q8N6K0 151 aa8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 OR1N2Q8NGR9 330 aa8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 C4orf3Q8WVX3 66 aa8.2□□□□□ -1.1
HLA-DMB-260ENST00000477537 NUDT3O95989 172 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 CDKN1BP46527 198 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 TCTAP57738 103 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 ODF1Q14990 250 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 HIST2H2BDQ6DRA6 164 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 C20orf78Q9BR46 151 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 DNAJC9-AS1A6NH13 148 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 ATP5LO75964 103 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 MPV17L2Q567V2 206 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 Q6ZSV7 163 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 JPT2Q9H910 190 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 PEMTQ9UBM1 199 aa8.19□□□□□ -1.1
HLA-DMB-260ENST00000477537 IGHV3-16A0A0C4DH30 117 aa8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 KNCNA6PVL3 124 aa8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 POM121L12Q8N7R1 296 aa8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 OR9G4Q8NGQ1 327 aa8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 KIF25-AS1Q9Y6Z4 181 aa8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
HLA-DMB-260ENST00000477537 IGHV1OR15-1A0A075B7D0 117 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 FGF6P10767 208 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms