RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 TIRAPP58753 221 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 RHOHQ15669 191 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 ZNF726P1Q15940 193 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 HIST1H2BAQ96A08 127 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 PTH2Q96A98 100 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 TNFRSF18Q9Y5U5 241 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 DNAH5Q8TE73 4624 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 TRAV8-6A0A0B4J262 113 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 TRBV6-4A0A1B0GX49 114 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 PEX7O00628 323 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 FGF8P55075 233 aaPredicted RBP10.68□□□□□ -0.7
CLDN11-204ENST00000477531 MAPKAPK5-AS1Q8N8E1 139 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 STOML3Q8TAV4 291 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 ARL2-SNX15V9GYD0 113 aa10.68□□□□□ -0.7
CLDN11-204ENST00000477531 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 IGHV3-38A0A0C4DH36 116 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 MAP1LC3B2A6NCE7 125 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 FAM74A7A6NL05 159 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 BCL2L11O43521 198 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 MGST1P10620 155 aaKnown RBP10.67□□□□□ -0.7
CLDN11-204ENST00000477531 ASIPP42127 132 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 EIF5AP63241 154 aaKnown RBP10.67□□□□□ -0.7
CLDN11-204ENST00000477531 ZNF506Q5JVG8 444 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 MAP1LC3BQ9GZQ8 125 aa10.67□□□□□ -0.7
CLDN11-204ENST00000477531 PCLOQ9Y6V0 5065 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 PGPEP1LA6NFU8 196 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 A8MWV9 139 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
CLDN11-204ENST00000477531 LGALSLQ3ZCW2 172 aaPredicted RBP10.66□□□□□ -0.7
CLDN11-204ENST00000477531 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 DPPA3Q6W0C5 159 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 TMUB2Q71RG4 321 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 ZFP30Q9Y2G7 519 aa10.66□□□□□ -0.7
CLDN11-204ENST00000477531 APOBP04114 4563 aaKnown RBP10.66□□□□□ -0.7
CLDN11-204ENST00000477531 B4DEV8 164 aa10.65□□□□□ -0.7
CLDN11-204ENST00000477531 UBE2G1P62253 170 aa10.65□□□□□ -0.7
CLDN11-204ENST00000477531 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.7
CLDN11-204ENST00000477531 CDPF1Q6NVV7 123 aa10.65□□□□□ -0.7
CLDN11-204ENST00000477531 Q86TA4 180 aa10.65□□□□□ -0.7
CLDN11-204ENST00000477531 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 ZFP2Q6ZN57 461 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 SYT8Q8NBV8 401 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 ATP6V0E2Q8NHE4 81 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 TCEAL7Q9BRU2 100 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 ZNF471Q9BX82 626 aaPredicted RBP10.64□□□□□ -0.71
CLDN11-204ENST00000477531 CYTL1Q9NRR1 136 aa10.64□□□□□ -0.71
CLDN11-204ENST00000477531 A0A087WTM6 91 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 PSCAO43653 123 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 FHITP49789 147 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 LINC01556Q5JQF7 62 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 C9orf62Q8N4C0 152 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 GTSF1LQ9H1H1 148 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 IL36BQ9NZH7 164 aa10.63□□□□□ -0.71
CLDN11-204ENST00000477531 TPT1P13693 172 aaKnown RBP10.62□□□□□ -0.71
CLDN11-204ENST00000477531 FAM162BQ5T6X4 162 aa10.62□□□□□ -0.71
CLDN11-204ENST00000477531 LELP1Q5T871 98 aa10.62□□□□□ -0.71
CLDN11-204ENST00000477531 KRTAP4-5Q9BYR2 181 aa10.62□□□□□ -0.71
CLDN11-204ENST00000477531 PARLQ9H300 379 aa10.62□□□□□ -0.71
CLDN11-204ENST00000477531 SCRT2Q9NQ03 307 aa10.62□□□□□ -0.71
CLDN11-204ENST00000477531 H3BVH4 76 aa10.61□□□□□ -0.71
CLDN11-204ENST00000477531 M0R036 132 aa10.61□□□□□ -0.71
CLDN11-204ENST00000477531 AKR1C3P42330 323 aa10.61□□□□□ -0.71
CLDN11-204ENST00000477531 SLC51BQ86UW2 128 aa10.61□□□□□ -0.71
CLDN11-204ENST00000477531 Q8N1X5 172 aa10.61□□□□□ -0.71
CLDN11-204ENST00000477531 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
CLDN11-204ENST00000477531 IBA57-AS1B1ANH7 110 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 UMAD1C9J7I0 102 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 KRBOX1C9JBD0 128 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 RHODO00212 210 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 SH2D1AO60880 128 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 EIF5AL1Q6IS14 154 aaKnown RBP10.6□□□□□ -0.71
CLDN11-204ENST00000477531 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
CLDN11-204ENST00000477531 TRBV6-1A0A0K0K1D8 114 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 IGHV3-33P01772 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 SEC11BP0C7V7 166 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 IGHV3-30-3P0DP02 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLDN11-204ENST00000477531 CRIP1P50238 77 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 GAGE1Q13065 139 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 GAGE4Q13068 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 GAGE5Q13069 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 DNLZQ5SXM8 178 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 DMRTA1Q5VZB9 504 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 FAM213BQ8TBF2 198 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 SFT2D1Q8WV19 159 aa10.59□□□□□ -0.71
CLDN11-204ENST00000477531 GRIFINA4D1Z8 144 aa10.58□□□□□ -0.72
CLDN11-204ENST00000477531 PAGE4O60829 102 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms