RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ZNF705DP0CH99 300 aaPredicted RBP12.43□□□□□ -0.42
EPHB4-204ENST00000477446 ZNF705BP0CI00 300 aaPredicted RBP12.43□□□□□ -0.42
EPHB4-204ENST00000477446 PRB4P10163 310 aaPredicted RBP12.43□□□□□ -0.42
EPHB4-204ENST00000477446 DEFB1P60022 68 aa12.43□□□□□ -0.42
EPHB4-204ENST00000477446 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
EPHB4-204ENST00000477446 MRAPQ8TCY5 172 aa12.43□□□□□ -0.42
EPHB4-204ENST00000477446 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
EPHB4-204ENST00000477446 LINC00614P0C842 121 aa12.43□□□□□ -0.42
EPHB4-204ENST00000477446 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
EPHB4-204ENST00000477446 RNASEKQ6P5S7 137 aaKnown RBP12.43□□□□□ -0.42
EPHB4-204ENST00000477446 AGRNO00468 2067 aa12.42□□□□□ -0.42
EPHB4-204ENST00000477446 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
EPHB4-204ENST00000477446 A8MZ25 164 aa12.42□□□□□ -0.42
EPHB4-204ENST00000477446 M0R2Z0 102 aa12.42□□□□□ -0.42
EPHB4-204ENST00000477446 U3KQK5 164 aa12.42□□□□□ -0.42
EPHB4-204ENST00000477446 NTF3P20783 257 aa12.41□□□□□ -0.42
EPHB4-204ENST00000477446 TEX43Q6ZNM6 134 aa12.41□□□□□ -0.42
EPHB4-204ENST00000477446 TMEM191AQ9H0A3 160 aa12.41□□□□□ -0.42
EPHB4-204ENST00000477446 RBMY1BA6NDE4 496 aaKnown RBP12.4□□□□□ -0.42
EPHB4-204ENST00000477446 RBMY1EA6NEQ0 496 aaKnown RBP12.4□□□□□ -0.42
EPHB4-204ENST00000477446 F6UB75 175 aa12.4□□□□□ -0.42
EPHB4-204ENST00000477446 RBMY1DP0C7P1 496 aaKnown RBP12.4□□□□□ -0.42
EPHB4-204ENST00000477446 DDTP30046 118 aa12.4□□□□□ -0.42
EPHB4-204ENST00000477446 KRTDAPP60985 99 aa12.4□□□□□ -0.42
EPHB4-204ENST00000477446 TWIST1Q15672 202 aa12.4□□□□□ -0.42
EPHB4-204ENST00000477446 ZNF575Q86XF7 245 aa12.4□□□□□ -0.42
EPHB4-204ENST00000477446 FOXI2Q6ZQN5 318 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 ORMDL3Q8N138 153 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 FAM19A2Q8N3H0 131 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 PPBPP02775 128 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 CACNG7P62955 275 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 STHQ8IWL8 128 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 OR8A1Q8NGG7 326 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 URB1-AS1Q96HZ7 61 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 PRO1933Q9H354 126 aa12.39□□□□□ -0.43
EPHB4-204ENST00000477446 A0A0J9YX75 114 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 H3BMM0 161 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 HLA-DRB4P13762 266 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 PMCHL1Q16048 86 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 EBLN2Q6P2I7 272 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 LAMTOR2Q9Y2Q5 125 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 HLA-DRB4X5D2U9 266 aa12.38□□□□□ -0.43
EPHB4-204ENST00000477446 RPL35AP18077 110 aaKnown RBP12.37□□□□□ -0.43
EPHB4-204ENST00000477446 CTAG1AP78358 180 aa12.37□□□□□ -0.43
EPHB4-204ENST00000477446 SMIM15Q7Z3B0 74 aa12.37□□□□□ -0.43
EPHB4-204ENST00000477446 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
EPHB4-204ENST00000477446 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 KIR2DL5BA0A0G2JN68 375 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 KIR2DL5BA0A0G2JPC4 375 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
EPHB4-204ENST00000477446 KIR2DL5AQ8N109 375 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 PRSS3P2Q8NHM4 247 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 C20orf144Q9BQM9 153 aa12.36□□□□□ -0.43
EPHB4-204ENST00000477446 SNAI2O43623 268 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 MRPL51Q4U2R6 128 aaKnown RBP12.35□□□□□ -0.43
EPHB4-204ENST00000477446 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 Q8N976 141 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 VAMP8Q9BV40 100 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 AP5S1Q9NUS5 200 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 IGKV3-20P01619 116 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 CKS2P33552 79 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 ODF3Q96PU9 254 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 C11orf21Q9P2W6 132 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
EPHB4-204ENST00000477446 IGHV1-24A0A0C4DH33 117 aa12.34□□□□□ -0.43
EPHB4-204ENST00000477446 D6R8Y8 96 aa12.34□□□□□ -0.43
EPHB4-204ENST00000477446 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
EPHB4-204ENST00000477446 CRXO43186 299 aaPredicted RBP12.33□□□□□ -0.44
EPHB4-204ENST00000477446 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
EPHB4-204ENST00000477446 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
EPHB4-204ENST00000477446 CLUHP3Q96NS8 147 aa12.33□□□□□ -0.44
EPHB4-204ENST00000477446 TMEM70Q9BUB7 260 aa12.33□□□□□ -0.44
EPHB4-204ENST00000477446 A8MTW9 85 aa12.32□□□□□ -0.44
EPHB4-204ENST00000477446 APOC4P55056 127 aa12.32□□□□□ -0.44
EPHB4-204ENST00000477446 KIR2DL5BQ8NHK3 375 aa12.32□□□□□ -0.44
EPHB4-204ENST00000477446 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
EPHB4-204ENST00000477446 C20orf202A1L168 122 aa12.31□□□□□ -0.44
EPHB4-204ENST00000477446 OR10AG1Q8NH19 301 aa12.31□□□□□ -0.44
EPHB4-204ENST00000477446 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
EPHB4-204ENST00000477446 B9D2Q9BPU9 175 aa12.31□□□□□ -0.44
EPHB4-204ENST00000477446 LEPP41159 167 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 SSTP61278 116 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-204ENST00000477446 AMTNQ6UX39 209 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MUC21A0A0G2JKD1 596 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MUC21A0A140T8X8 626 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 KLLNB2CW77 178 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 GIG44P09565 113 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-204ENST00000477446 ASIPP42127 132 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms