RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 TMEM191AQ9H0A3 160 aa4.91□□□□□ -1.62
CCDC30-209ENST00000477155 TRAV26-2A0A0B4J265 109 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 RBMY1BA6NDE4 496 aaKnown RBP4.9□□□□□ -1.62
CCDC30-209ENST00000477155 RBMY1EA6NEQ0 496 aaKnown RBP4.9□□□□□ -1.62
CCDC30-209ENST00000477155 SCGB1D1O95968 90 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 RBMY1DP0C7P1 496 aaKnown RBP4.9□□□□□ -1.62
CCDC30-209ENST00000477155 HLA-DRB4P13762 266 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 Q6ZWC4 215 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 PRSS3P2Q8NHM4 247 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 CNFNQ9BYD5 112 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 MDFICQ9P1T7 246 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 HLA-DRB4X5D2U9 266 aa4.9□□□□□ -1.62
CCDC30-209ENST00000477155 LINC00614P0C842 121 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 SMIM15Q7Z3B0 74 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 ORMDL3Q8N138 153 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 Q8N1Y9 231 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 C14orf178Q8N769 122 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-209ENST00000477155 RNF185Q96GF1 192 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 TRRAPQ9Y4A5 3859 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 SNAI2O43623 268 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 RBMY1A1P0DJD3 496 aaKnown RBP4.9□□□□□ -1.63
CCDC30-209ENST00000477155 RBMY1CP0DJD4 496 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 ESDP10768 282 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-209ENST00000477155 KRTDAPP60985 99 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 RBMY1FQ15415 496 aaKnown RBP4.9□□□□□ -1.63
CCDC30-209ENST00000477155 NDUFA11Q86Y39 141 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 SPATA3Q8NHX4 192 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 WFDC10AQ9H1F0 79 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 JPT2Q9H910 190 aa4.9□□□□□ -1.63
CCDC30-209ENST00000477155 OR11H12B2RN74 326 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 NPYP01303 97 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
CCDC30-209ENST00000477155 XCL2Q9UBD3 114 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 IGHV3OR16-12A0A075B7B8 117 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 IGHV1OR15-1A0A075B7D0 117 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 TRAV2A0A0B4J234 112 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 TRAV25A0A0B4J276 109 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 CRXO43186 299 aaPredicted RBP4.89□□□□□ -1.63
CCDC30-209ENST00000477155 STHQ8IWL8 128 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 ODF3Q96PU9 254 aa4.89□□□□□ -1.63
CCDC30-209ENST00000477155 CBY3A6NI87 242 aa4.88□□□□□ -1.63
CCDC30-209ENST00000477155 CACNG7P62955 275 aa4.88□□□□□ -1.63
CCDC30-209ENST00000477155 SIGLEC8Q9NYZ4 499 aa4.88□□□□□ -1.63
CCDC30-209ENST00000477155 IGLV1-51P01701 117 aa4.88□□□□□ -1.63
CCDC30-209ENST00000477155 MGPP08493 103 aa4.88□□□□□ -1.63
CCDC30-209ENST00000477155 FA2HQ7L5A8 372 aa4.88□□□□□ -1.63
CCDC30-209ENST00000477155 IGHV4-4A0A075B6R2 117 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 A0A087WWL8 130 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 IGHV3-16A0A0C4DH30 117 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 LINC01587Q99440 93 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 AP5S1Q9NUS5 200 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 U3KQK5 164 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 STAB1Q9NY15 2570 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 IGHV1-24A0A0C4DH33 117 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 TNFRSF6BO95407 300 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 RPL35AP18077 110 aaKnown RBP4.87□□□□□ -1.63
CCDC30-209ENST00000477155 TDRG1Q3Y452 100 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 FAM74A4Q5TZK3 123 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 LINC00173Q6ZV60 143 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 LINC00482Q8N8I6 264 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 TMEM208Q9BTX3 173 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 SCRT2Q9NQ03 307 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 NACAE9PAV3 2078 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 H0Y8G0 127 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 C3orf79P0CE67 100 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 DEFB104AQ8WTQ1 72 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 MAST4O15021 2626 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
CCDC30-209ENST00000477155 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
CCDC30-209ENST00000477155 F5H697 171 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 CHCHD1Q96BP2 118 aaKnown RBP4.86□□□□□ -1.63
CCDC30-209ENST00000477155 PRO1933Q9H354 126 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 LEPROTL1O95214 131 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 PPBPP02775 128 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 SMIM17P0DL12 118 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
CCDC30-209ENST00000477155 DPH3P1Q9H4G8 78 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 GSN-AS1Q9NRJ2 163 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 OR2K2Q8NGT1 345 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 RPL39LQ96EH5 51 aaKnown RBP4.86□□□□□ -1.63
CCDC30-209ENST00000477155 AP1S3Q96PC3 154 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 MAP1LC3AQ9H492 121 aa4.86□□□□□ -1.63
CCDC30-209ENST00000477155 MED14OSP0DP75 135 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 S100A12P80511 92 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 DNLZQ5SXM8 178 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 ATOH7Q8N100 152 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 IGHV3-73A0A0B4J1V6 119 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 A8MTW9 85 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 TRPT1Q86TN4 253 aaKnown RBP4.85□□□□□ -1.63
CCDC30-209ENST00000477155 DEFB125Q8N687 156 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 C9orf85Q96MD7 179 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 TRGV11A0A075B6L2 103 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 INSP01308 110 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 AZU1P20160 251 aa4.85□□□□□ -1.63
CCDC30-209ENST00000477155 NUTF2P61970 127 aaKnown RBP4.85□□□□□ -1.63
CCDC30-209ENST00000477155 CITED1Q99966 193 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms